RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 POF1BQ8WVV4 589 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 RUFY2Q8WXA3 655 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PPP2R3CQ969Q6 453 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 RMDN1Q96DB5 314 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 HCN2Q9UL51 889 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PADI3Q9ULW8 664 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 PCDHGC4Q9Y5F7 938 aa11.03□□□□□ -0.64
SPG11-212ENST00000558790 ZZEF1O43149 2961 aa11.02□□□□□ -0.64
SPG11-212ENST00000558790 FRYQ5TBA9 3013 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 M0QZ92 97 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 PRC1O43663 620 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 FAM13AO94988 1023 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 RPLP2P05387 115 aaKnown RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 SMARCA1P28370 1054 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 AVPR2P30518 371 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 ZXDAP98168 799 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 COASYQ13057 564 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 TMEM266Q2M3C6 531 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 NAALADL2Q58DX5 795 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 RBM23Q86U06 439 aaKnown RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 GPR161Q8N6U8 529 aaKnown RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 BRD7Q9NPI1 651 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 JADE2Q9NQC1 790 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
SPG11-212ENST00000558790 C2orf16Q68DN1 1984 aa11.02□□□□□ -0.65
SPG11-212ENST00000558790 RRN3P2A6NIE6 340 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 LOC730098B7Z3J9 87 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 MGEA5O60502 916 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 NPR3P17342 541 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 ACTR2P61160 394 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 RBM10P98175 930 aaKnown RBP11.01□□□□□ -0.65
SPG11-212ENST00000558790 COL9A2Q14055 689 aaPredicted RBP11.01□□□□□ -0.65
SPG11-212ENST00000558790 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 CASC1Q6TDU7 716 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 FRMD5Q7Z6J6 570 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 CYP2W1Q8TAV3 490 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 GPR152Q8TDT2 470 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 NANOS1Q8WY41 292 aaKnown RBP11.01□□□□□ -0.65
SPG11-212ENST00000558790 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 NDFIP2Q9NV92 336 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 PCDHA6Q9UN73 950 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 PCDHA8Q9Y5H6 950 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 PCDHA2Q9Y5H9 948 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 SQORQ9Y6N5 450 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 KDM3AQ9Y4C1 1321 aa11.01□□□□□ -0.65
SPG11-212ENST00000558790 CCDC69A6NI79 296 aa11□□□□□ -0.65
SPG11-212ENST00000558790 FAM157BP0CG42 384 aa11□□□□□ -0.65
SPG11-212ENST00000558790 STAG3L1P0CL83 205 aa11□□□□□ -0.65
SPG11-212ENST00000558790 MAPTP10636 758 aaKnown RBP11□□□□□ -0.65
SPG11-212ENST00000558790 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
SPG11-212ENST00000558790 NBL1P41271 181 aa11□□□□□ -0.65
SPG11-212ENST00000558790 SARSP49591 514 aaKnown RBP11□□□□□ -0.65
SPG11-212ENST00000558790 GNAQP50148 359 aa11□□□□□ -0.65
SPG11-212ENST00000558790 KRT76Q01546 638 aa11□□□□□ -0.65
SPG11-212ENST00000558790 TNP2Q05952 138 aa11□□□□□ -0.65
SPG11-212ENST00000558790 SFSWAPQ12872 951 aaKnown RBP11□□□□□ -0.65
SPG11-212ENST00000558790 ITGB3BPQ13352 177 aaPredicted RBP11□□□□□ -0.65
SPG11-212ENST00000558790 CBX2Q14781 532 aaPredicted RBP11□□□□□ -0.65
SPG11-212ENST00000558790 TMTC3Q6ZXV5 915 aa11□□□□□ -0.65
SPG11-212ENST00000558790 SND1Q7KZF4 910 aaKnown RBP eCLIP11□□□□□ -0.65
SPG11-212ENST00000558790 HEATR3Q7Z4Q2 680 aa11□□□□□ -0.65
SPG11-212ENST00000558790 RGL4Q8IZJ4 473 aa11□□□□□ -0.65
SPG11-212ENST00000558790 VN1R2Q8NFZ6 395 aa11□□□□□ -0.65
SPG11-212ENST00000558790 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
SPG11-212ENST00000558790 MAP4K1Q92918 833 aa11□□□□□ -0.65
SPG11-212ENST00000558790 ASIC4Q96FT7 647 aa11□□□□□ -0.65
SPG11-212ENST00000558790 PGBD1Q96JS3 809 aa11□□□□□ -0.65
SPG11-212ENST00000558790 CELF4Q9BZC1 486 aaKnown RBP11□□□□□ -0.65
SPG11-212ENST00000558790 NFASCO94856 1347 aa11□□□□□ -0.65
SPG11-212ENST00000558790 CNTNAP5Q8WYK1 1306 aa11□□□□□ -0.65
SPG11-212ENST00000558790 SPEGQ15772 3267 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 SMIM35A0A1B0GVV1 85 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 PER2O15055 1255 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 EFSO43281 561 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 CD33P20138 364 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 MCM5P33992 734 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 ARSDP51689 593 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 MTHFD1LQ6UB35 978 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 PLPPR4Q7Z2D5 763 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 TMEM87BQ96K49 555 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 MXRA8Q9BRK3 442 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 SDF4Q9BRK5 362 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
SPG11-212ENST00000558790 GINS2Q9Y248 185 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms