RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 ZBP1Q9H171 429 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 ADAM7Q9H2U9 754 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 HCFC2Q9Y5Z7 792 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 IRAK3Q9Y616 596 aa12.83□□□□□ -0.36
CASC4-205ENST00000558735 NEMFO60524 1076 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 CTSAP10619 480 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 NCLP19338 710 aaKnown RBP12.82□□□□□ -0.36
CASC4-205ENST00000558735 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 RARRES1P49788 294 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 ZBTB33Q86T24 672 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
CASC4-205ENST00000558735 ZDHHC14Q8IZN3 488 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 ASAP3Q8TDY4 903 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 CASP10Q92851 521 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 KIF2CQ99661 725 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 EIF2AQ9BY44 585 aaKnown RBP12.82□□□□□ -0.36
CASC4-205ENST00000558735 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 MIOSQ9NXC5 875 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 KANSL3Q9P2N6 904 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
CASC4-205ENST00000558735 CARNS1A5YM72 827 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 POTEMA6NI47 508 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 C2CD4DB7Z1M9 353 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 TSPAN1O60635 241 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 LILRB3O75022 631 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 DGAT1O75907 488 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 POMCP01189 267 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 GLRA2P23416 452 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 MCM7P33993 719 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
CASC4-205ENST00000558735 AMHR2Q16671 573 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 CATSPER3Q86XQ3 398 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 SLC22A17Q8WUG5 538 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 NKD2Q969F2 451 aaPredicted RBP12.81□□□□□ -0.36
CASC4-205ENST00000558735 CPB2Q96IY4 423 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 FAN1Q9Y2M0 1017 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 IPPQ9Y573 584 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
CASC4-205ENST00000558735 INO80B-WBP1J3KQ70 363 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 NRP1O14786 923 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 MED24O75448 989 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 ERLIN2O94905 339 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 ITGA4P13612 1032 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 AXLP30530 894 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 MTHFRP42898 656 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 MBTD1Q05BQ5 628 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 CAPSQ13938 189 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 TFDP1Q14186 410 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 PCBP1Q15365 356 aaKnown RBP eCLIP12.8□□□□□ -0.36
CASC4-205ENST00000558735 ZNF174Q15697 407 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
CASC4-205ENST00000558735 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 URGCPQ8TCY9 931 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
CASC4-205ENST00000558735 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 HES2Q9Y543 173 aa12.8□□□□□ -0.36
CASC4-205ENST00000558735 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 ARL5CA6NH57 179 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 INPPL1O15357 1258 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 EPCAMP16422 314 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 ARF4P18085 180 aaPredicted RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 CA8P35219 290 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 ID4P47928 161 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 GIT2Q14161 759 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
CASC4-205ENST00000558735 NOTUMQ6P988 496 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 MAEAQ7L5Y9 396 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 TAS1R1Q7RTX1 841 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 COLGALT2Q8IYK4 626 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 FEZF2Q8TBJ5 459 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 FAM193BQ96PV7 902 aaPredicted RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 GAD1Q99259 594 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 POLR3CQ9BUI4 534 aaPredicted RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 NFKBIZQ9BYH8 718 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
CASC4-205ENST00000558735 TUFT1Q9NNX1 390 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 UBN1Q9NPG3 1134 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 GPRC5CQ9NQ84 441 aa12.79□□□□□ -0.36
CASC4-205ENST00000558735 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 B4GALT5O43286 388 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 USO1O60763 962 aaKnown RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 EFEMP2O95967 443 aa12.78□□□□□ -0.36
CASC4-205ENST00000558735 CNPP09543 421 aaKnown RBP12.78□□□□□ -0.36
CASC4-205ENST00000558735 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms