RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 GLG1Q92896 1179 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 HIC2Q96JB3 615 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 SMG5Q9UPR3 1016 aaKnown RBP17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 ZNF510Q9Y2H8 683 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
HMBOX1-212ENST00000558662 DCCP43146 1447 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 CYP27B1O15528 508 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 PSMG1O95456 288 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 LYNP07948 512 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 FAM200BP0CF97 657 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 EPHB2P29323 1055 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 STAT1P42224 750 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 COASYQ13057 564 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 SPARCL1Q14515 664 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 SEL1L2Q5TEA6 688 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 FAM89AQ96GI7 184 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 CDC42EP4Q9H3Q1 356 aaKnown RBP17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 C6orf50Q9HD87 102 aa17.33■□□□□ 0.37
HMBOX1-212ENST00000558662 DDX3XO00571 662 aaKnown RBP eCLIP17.33■□□□□ 0.362e-7■□□□□ 8.1
HMBOX1-212ENST00000558662 EDF1O60869 148 aaKnown RBP17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 GAS8O95995 478 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 FAM163BP0C2L3 166 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 SULT2A1Q06520 285 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 RCN1Q15293 331 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 KRT79Q5XKE5 535 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 KLC3Q6P597 504 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 CCDC137Q6PK04 289 aaKnown RBP17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 RNF168Q8IYW5 571 aaPredicted RBP17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 HPS3Q969F9 1004 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 VTI1AQ96AJ9 217 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 PNMA5Q96PV4 448 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 SMC6Q96SB8 1091 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 BTBD10Q9BSF8 475 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 GOLPH3Q9H4A6 298 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 PHTF1Q9UMS5 762 aa17.33■□□□□ 0.36
HMBOX1-212ENST00000558662 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 PALM3A6NDB9 673 aaPredicted RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 hCG_1984214I3L0E3 225 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 CCNT1O60563 726 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ABHD2P08910 425 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 TECP42680 631 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 PDK4Q16654 411 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 FYB2Q5VWT5 728 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 MARK2Q7KZI7 788 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 HS2ST1Q7LGA3 356 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 TTC8Q8TAM2 541 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 C10orf82Q8WW14 230 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ZFP69BQ9UJL9 534 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 WDR37Q9Y2I8 494 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 NR2E1Q9Y466 385 aa17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 BAZ2AQ9UIF9 1905 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-212ENST00000558662 ANKRD62A6NC57 917 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 SLC16A3O15427 465 aaKnown RBP17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 STRNO43815 780 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 ENTPD5O75356 428 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 UPP2O95045 317 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 CPA3P15088 417 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PON1P27169 355 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 COILP38432 576 aaPredicted RBP17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 LONRF1Q17RB8 773 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PHLDB2Q86SQ0 1253 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PHC3Q8NDX5 983 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 GDAP1Q8TB36 358 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 U2AF1L4Q8WU68 220 aaKnown RBP17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PLVAPQ9BX97 442 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 IQCGQ9H095 443 aaKnown RBP17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 KCTD10Q9H3F6 313 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 PPP1R9AQ9ULJ8 1098 aa17.31■□□□□ 0.36
HMBOX1-212ENST00000558662 EIF4E1BA6NMX2 242 aaKnown RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 H0Y3Z8 333 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 CAPN9O14815 690 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ASMTLO95671 621 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ECEL1O95672 775 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 XIAPP98170 497 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 KHDC1Q4VXA5 237 aaKnown RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 HYIQ5T013 277 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 FAM91A1Q658Y4 838 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 RHBDF2Q6PJF5 856 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 TDRPQ86YL5 185 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms