RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 IL1RAPL1Q9NZN1 696 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 COMMD3-BMI1R4GMX3 469 aa12.02□□□□□ -0.49
PCAT29-201ENST00000558411 TTC4O95801 387 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 COILP38432 576 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SERPINB4P48594 390 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 NAPAP54920 295 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF211Q13398 564 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MYBPC3Q14896 1274 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ANKRD35Q8N283 1001 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 TBCKQ8TEA7 893 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SLCO2A1Q92959 643 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 TUBB6Q9BUF5 446 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF212Q9UDV6 495 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MTUS1Q9ULD2 1270 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 NUP98P52948 1817 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 PALM3A6NDB9 673 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SMCO2A6NFE2 343 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 HGSO14964 777 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SLC26A4O43511 780 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MUTP22033 750 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 CNPY1Q3B7I2 92 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 KHDC1Q4VXA5 237 aaKnown RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SLC45A4Q5BKX6 768 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 HYIQ5T013 277 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 KCNK18Q7Z418 384 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ZC3H18Q86VM9 953 aaKnown RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 RHOT2Q8IXI1 618 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF398Q8TD17 642 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 SPATA16Q9BXB7 569 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 PPP1R12CQ9BZL4 782 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 MIS12Q9H081 205 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 DHX36Q9H2U1 1008 aaKnown RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
PCAT29-201ENST00000558411 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.01□□□□□ -0.49
PCAT29-201ENST00000558411 LTBP4Q8N2S1 1624 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 FAM47DPA6NHR8 397 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 SNAP23O00161 211 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 MAP3K7O43318 606 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 CDH16O75309 829 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 ZWINTO95229 277 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
PCAT29-201ENST00000558411 ITIH2P19823 946 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 NR2F2P24468 414 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 CDR2Q01850 454 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 SFSWAPQ12872 951 aaKnown RBP12□□□□□ -0.49
PCAT29-201ENST00000558411 NR1H3Q13133 447 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 LSAMPQ13449 338 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 RCN1Q15293 331 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 SEL1L2Q5TEA6 688 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 RHBDF2Q6PJF5 856 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 MORC4Q8TE76 937 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 C10orf82Q8WW14 230 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 CENPKQ9BS16 269 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 SYT11Q9BT88 431 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
PCAT29-201ENST00000558411 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 DCP1AQ9NPI6 582 aaPredicted RBP12□□□□□ -0.49
PCAT29-201ENST00000558411 AAASQ9NRG9 546 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC87Q9NVE4 849 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 STX18Q9P2W9 335 aaKnown RBP12□□□□□ -0.49
PCAT29-201ENST00000558411 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
PCAT29-201ENST00000558411 ANKRD62A6NC57 917 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ACSL3O95573 720 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ASMTLO95671 621 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 SOX5P35711 763 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CAV1Q03135 178 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 MCL1Q07820 350 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 DAB2IPQ5VWQ8 1189 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 MIGA2Q7L4E1 593 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC25Q86WR0 208 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC105Q8IYK2 499 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 NRG4Q8WWG1 115 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 OLFM3Q96PB7 478 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF184Q99676 751 aaPredicted RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ZSWIM1Q9BR11 485 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 IL17RBQ9NRM6 502 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CIDEBQ9UHD4 219 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 IGSF9BQ9UPX0 1349 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ANKRD63C9JTQ0 380 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 CCDC22O60826 627 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 EDF1O60869 148 aaKnown RBP11.99□□□□□ -0.49
PCAT29-201ENST00000558411 PSMG1O95456 288 aa11.99□□□□□ -0.49
PCAT29-201ENST00000558411 ECEL1O95672 775 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms