RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 B4GALT5O43286 388 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
TPM1-211ENST00000558314 NPTXRO95502 500 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 GLRA2P23416 452 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 RARRES1P49788 294 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 SCNN1GP51170 649 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 ITIH3Q06033 890 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 GIT2Q14161 759 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 PTPN14Q15678 1187 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 ZFP42Q96MM3 310 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 EMILIN2Q9BXX0 1053 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 DZANK1Q9NVP4 752 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 PARP2Q9UGN5 583 aa17.26■□□□□ 0.35
TPM1-211ENST00000558314 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 AKAP5P24588 427 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 AXLP30530 894 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
TPM1-211ENST00000558314 MTHFRP42898 656 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 MBTD1Q05BQ5 628 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 SIGLEC14Q08ET2 396 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 ATAT1Q5SQI0 421 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 HACE1Q8IYU2 909 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 FAM184AQ8NB25 1140 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 NECTIN4Q96NY8 510 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 KLHL5Q96PQ7 755 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 TMEM175Q9BSA9 504 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 MRPL17Q9NRX2 175 aaKnown RBP17.25■□□□□ 0.35
TPM1-211ENST00000558314 KLK14Q9P0G3 267 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 TECTAO75443 2155 aa17.25■□□□□ 0.35
TPM1-211ENST00000558314 ARL5CA6NH57 179 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 LYPLA2O95372 231 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 URODP06132 367 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 ARF4P18085 180 aaPredicted RBP17.24■□□□□ 0.35
TPM1-211ENST00000558314 ARL2P36404 184 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 KIAA1841Q6NSI8 718 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 KREMEN2Q8NCW0 462 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 FEZF2Q8TBJ5 459 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 RABGGTAQ92696 567 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 NXF3Q9H4D5 531 aaKnown RBP17.24■□□□□ 0.35
TPM1-211ENST00000558314 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
TPM1-211ENST00000558314 F8W810 466 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 MED24O75448 989 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 NR1I2O75469 434 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 ASGR2P07307 311 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
TPM1-211ENST00000558314 NHLH1Q02575 133 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 TAS1R1Q7RTX1 841 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 PPFIBP1Q86W92 1011 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 CATSPER3Q86XQ3 398 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 TDRD5Q8NAT2 981 aaKnown RBP17.23■□□□□ 0.35
TPM1-211ENST00000558314 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 CCDC51Q96ER9 411 aa17.23■□□□□ 0.35
TPM1-211ENST00000558314 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 AMHR2Q16671 573 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 IER5LQ5T953 404 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 ZBTB8OSQ8IWT0 167 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 FBXL6Q8N531 539 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 SMOC2Q9H3U7 446 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 SFXN1Q9H9B4 322 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
TPM1-211ENST00000558314 SOD2P04179 222 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 SPATA31D3P0C874 917 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 GLUD2P49448 558 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 CLCN4P51793 760 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 MTMR3Q13615 1198 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 NBR1Q14596 966 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.354e-6■□□□□ 10.4
TPM1-211ENST00000558314 TTC38Q5R3I4 469 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 SLC27A1Q6PCB7 646 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 SPATA31D4Q6ZUB0 917 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 GIT1Q9Y2X7 761 aa17.21■□□□□ 0.35
TPM1-211ENST00000558314 PDGFBP01127 241 aaPredicted RBP17.2■□□□□ 0.34
TPM1-211ENST00000558314 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
TPM1-211ENST00000558314 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms