RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NRP1O14786 923 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 TEX28O15482 410 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 CSDE1O75534 798 aaKnown RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 RFPL2O75678 378 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 DDHD2O94830 711 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 PAPLNO95428 1278 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 OATP04181 439 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 ADRB1P08588 477 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SPATA31D3P0C874 917 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 GLULP15104 373 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SFNP31947 248 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 NRLP54845 237 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 GPC5P78333 572 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SETQ01105 290 aaPredicted RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 PFKPQ01813 784 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SNW1Q13573 536 aaKnown RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 HTR4Q13639 388 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 UBXN2BQ14CS0 331 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 ZBTB41Q5SVQ8 909 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 JAKMIP3Q5VZ66 844 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 SPATA31D4Q6ZUB0 917 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 CATSPER4Q7RTX7 472 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 MRPL10Q7Z7H8 261 aaKnown RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 ZNF410Q86VK4 478 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 PALB2Q86YC2 1186 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 ZNF280BQ86YH2 543 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 ZBTB44Q8NCP5 570 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 CNNM3Q8NE01 707 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 BCL7CQ8WUZ0 217 aaPredicted RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 MAP4K1Q92918 833 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 JPH2Q9BR39 696 aaPredicted RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 FDXACB1Q9BRP7 624 aaPredicted RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 COLEC11Q9BWP8 271 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 VN1R3Q9BXE9 311 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 FAM126AQ9BYI3 521 aaPredicted RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 PRKD2Q9BZL6 878 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 FOXQ1Q9C009 403 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 IL25Q9H293 177 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 DISC1Q9NRI5 854 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.83□□□□□ -1.48
SPG11-208ENST00000558155 ZDHHC7Q9NXF8 308 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 RAB23Q9ULC3 237 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 PIN4Q9Y237 131 aaKnown RBP5.83□□□□□ -1.48
SPG11-208ENST00000558155 PCDHB2Q9Y5E7 798 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 TAF6LQ9Y6J9 622 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 NUMBLQ9Y6R0 609 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 MIA3Q5JRA6 1907 aa5.83□□□□□ -1.48
SPG11-208ENST00000558155 WDR81Q562E7 1941 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 CNTNAP2Q9UHC6 1331 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 CEP250Q9BV73 2442 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 IGLV3-22A0A075B6J6 115 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 ZNF862O60290 1169 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 LRRN2O75325 713 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 POMCP01189 267 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 MYBP10242 640 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 FSHRP23945 695 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 CHMLP26374 656 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 OR1G1P47890 313 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 GLUD2P49448 558 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 CLK2P49760 499 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 JAK3P52333 1124 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 DSG1Q02413 1049 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 TARBP2Q15633 366 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 MLF2Q15773 248 aaPredicted RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 PRR16Q569H4 304 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 XKR3Q5GH77 459 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 TYW1BQ6NUM6 668 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 AGMOQ6ZNB7 445 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 MTSS1LQ765P7 747 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 GET4Q7L5D6 327 aaPredicted RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 TAS1R1Q7RTX1 841 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 SGMS1Q86VZ5 419 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 MICU3Q86XE3 530 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 RAB11FIP4Q86YS3 637 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 RHPN2Q8IUC4 686 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 EXOC8Q8IYI6 725 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 GPR65Q8IYL9 337 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 DDX23Q9BUQ8 820 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 HERC2P3Q9BVR0 1158 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 NIFKQ9BYG3 293 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 EPC1Q9H2F5 836 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 RSAD1Q9HA92 442 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 C6orf50Q9HD87 102 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 BARHL2Q9NY43 387 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 FNIP2Q9P278 1114 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 SUCLA2Q9P2R7 463 aaPredicted RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 CDH7Q9ULB5 785 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 SMG5Q9UPR3 1016 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 MRPS17Q9Y2R5 130 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 RBM8AQ9Y5S9 174 aaKnown RBP5.82□□□□□ -1.48
SPG11-208ENST00000558155 CACNA1GO43497 2377 aa5.82□□□□□ -1.48
SPG11-208ENST00000558155 RALGAPA1Q6GYQ0 2036 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 IGKV6-21A0A0C4DH24 114 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 GOLGA8CPA6NN73 597 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 MEIS3P2A8K0S8 358 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 DDX11L8A8MPP1 907 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 SLC30A4O14863 429 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 SGSM2O43147 1006 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 TGM5O43548 720 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 EIF5BO60841 1220 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms