RNA–Protein interactions for RNA: ENST00000557920.1

KNSTRN-204, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-204ENST00000557920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 CPLX4Q7Z7G2 160 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 GRK7Q8WTQ7 553 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 CD101Q93033 1021 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 SEC16BQ96JE7 1060 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 CENPHQ9H3R5 247 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 LRRC19Q9H756 370 aa13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 PPANQ9NQ55 473 aaKnown RBP13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
KNSTRN-204ENST00000557920 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 DNAJC8O75937 253 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ICAM1P05362 532 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ITIH2P19823 946 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ABCB4P21439 1286 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 DRD4P21917 467 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 COILP38432 576 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 MXI1P50539 228 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 GPC3P51654 580 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 JAK3P52333 1124 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 SEC24CP53992 1094 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 BPIFB4P59827 614 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 PTP4A2Q12974 167 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 IFT88Q13099 833 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 PCNX4Q63HM2 1172 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ZDHHC24Q6UX98 284 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 SHC3Q92529 594 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 KCNN1Q92952 543 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ART4Q93070 314 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ARHGEF26Q96DR7 871 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ZFP91Q96JP5 570 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 DPH5Q9H2P9 285 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 GOLPH3Q9H4A6 298 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 AVENQ9NQS1 362 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 TCEAL9Q9UHQ7 104 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 UBIAD1Q9Y5Z9 338 aa13.75□□□□□ -0.21
KNSTRN-204ENST00000557920 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 FSCN2O14926 492 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 PLSCR1O15162 318 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 TCEA3O75764 348 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 RASSF9O75901 435 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 CDR2Q01850 454 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 ARHGAP44Q17R89 818 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 KRT39Q6A163 491 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 FAM83AQ86UY5 434 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 SLC13A5Q86YT5 568 aaPredicted RBP13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 DAW1Q8N136 415 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 PRELID2Q8N945 189 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 EPS8L1Q8TE68 723 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 SPIRE2Q8WWL2 714 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 ALG3Q92685 438 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 CCDC114Q96M63 670 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 SEPT11Q9NVA2 429 aaKnown RBP13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 GRHL1Q9NZI5 618 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 HSPBP1Q9NZL4 362 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 COG5Q9UP83 839 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
KNSTRN-204ENST00000557920 IGSF9BQ9UPX0 1349 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 CFAP73A6NFT4 308 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 MAFGO15525 162 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 CHMP2AO43633 222 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 ECEL1O95672 775 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 ARP10275 920 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 FLT3P36888 993 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 RARRES1P49788 294 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 RTP1P59025 263 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 KRT76Q01546 638 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 XRCC4Q13426 336 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 COG2Q14746 738 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 SKIDA1Q1XH10 827 aa13.73□□□□□ -0.21
KNSTRN-204ENST00000557920 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms