RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ACKR2O00590 384 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GNB5O14775 395 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 NRP2O60462 931 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 CELA2BP08218 269 aaPredicted RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 KITP10721 976 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 VDRP11473 427 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GSPT1P15170 499 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 NRG3P56975 720 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 MGAT2Q10469 447 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 ANKRD45Q5TZF3 282 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 KLHDC7AQ5VTJ3 777 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SPATA1Q5VX52 437 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 PDXDC1Q6P996 788 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 C16orf54Q6UWD8 224 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 BEND4Q6ZU67 534 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 BEND5Q7L4P6 421 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 HEATR3Q7Z4Q2 680 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SESTD1Q86VW0 696 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 DCP2Q8IU60 420 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 LYSMD2Q8IV50 215 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 RBM12BQ8IXT5 1001 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 OR8H2Q8N162 312 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 ESX1Q8N693 406 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 CDYL2Q8N8U2 506 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 ATP11CQ8NB49 1132 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GLB1L3Q8NCI6 653 aaPredicted RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 NEDD1Q8NHV4 660 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 CALML6Q8TD86 181 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 BRIX1Q8TDN6 353 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 NUP133Q8WUM0 1156 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 GAB3Q8WWW8 586 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SEC14L1Q92503 715 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 DPF2Q92785 391 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 IQCDQ96DY2 449 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 MSLNLQ96KJ4 702 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 FAM167BQ9BTA0 163 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 BRIP1Q9BX63 1249 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SORBS1Q9BX66 1292 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 RSPH9Q9H1X1 276 aaPredicted RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 OBP2BQ9NPH6 170 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 RIC8AQ9NPQ8 531 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 HELLSQ9NRZ9 838 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 TM7SF3Q9NS93 570 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 RBM12Q9NTZ6 932 aaKnown RBP4.43□□□□□ -1.7
TDP1-217ENST00000557782 PNPOQ9NVS9 261 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SCOCQ9UIL1 159 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SLC39A10Q9ULF5 831 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 SYNPO2Q9UMS6 1093 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 TELO2Q9Y4R8 837 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 PCDHA13Q9Y5I0 950 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 USP19O94966 1318 aa4.43□□□□□ -1.7
TDP1-217ENST00000557782 C9orf172C9J069 976 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PPP1R11O60927 126 aaPredicted RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 TMCC2O75069 709 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 TADA3O75528 432 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 NTRK1P04629 796 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 SLURP2P0DP57 97 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 TYRP14679 529 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 HOXB4P17483 251 aaPredicted RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 FGFR2P21802 821 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 RPS6KB1P23443 525 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 CNTFP26441 200 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 AOAHP28039 575 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 SERPINF1P36955 418 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 ITGA8P53708 1063 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 CLNS1AP54105 237 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 SUMO3P55854 103 aaPredicted RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 MYBPC2Q14324 1141 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PLS1Q14651 629 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 NOMO1Q15155 1222 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 GRIK4Q16099 956 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 NKPD1Q17RQ9 610 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 WDR45BQ5MNZ6 344 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 TSHZ3Q63HK5 1081 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 ITPRIPL1Q6GPH6 555 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 UNQ6494/PRO21346Q6UXR6 183 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 BRINP3Q76B58 766 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 ZAR1Q86SH2 424 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 ARMC10Q8N2F6 343 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 PCYOX1LQ8NBM8 494 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 OR10H5Q8NGA6 315 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 LENG1Q96BZ8 264 aaPredicted RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 HIST1H2AHQ96KK5 128 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 HSPA12BQ96MM6 686 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 NACC1Q96RE7 527 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 JMJD8Q96S16 334 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 HIST1H2AJQ99878 128 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 NUDT16L1Q9BRJ7 211 aaKnown RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 PDGFDQ9GZP0 370 aaPredicted RBP4.42□□□□□ -1.7
TDP1-217ENST00000557782 AP5M1Q9H0R1 490 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 MTG2Q9H4K7 406 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 MANSC1Q9H8J5 431 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 MKNK2Q9HBH9 465 aa4.42□□□□□ -1.7
TDP1-217ENST00000557782 VPS45Q9NRW7 570 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms