RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 K7ENM7 598 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 EIF3DO15371 548 aaKnown RBP eCLIP15.03■□□□□ -0
SHMT2-234ENST00000557703 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
SHMT2-234ENST00000557703 TOM1L1O75674 476 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 FGFR4P22455 802 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 DNAJB2P25686 324 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 SNRPFP62306 86 aaKnown RBP15.03■□□□□ -0
SHMT2-234ENST00000557703 ASIC1P78348 528 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 POSTNQ15063 836 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 TMEM132AQ24JP5 1023 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 ATF7IP2Q5U623 682 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 SLFN12LQ6IEE8 588 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 MAP4K3Q8IVH8 894 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 ABI1Q8IZP0 508 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 TIFAQ96CG3 184 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 CHAMP1Q96JM3 812 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 FIZ1Q96SL8 496 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 ACO2Q99798 780 aaKnown RBP15.03■□□□□ -0
SHMT2-234ENST00000557703 STRA6Q9BX79 667 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 TMEM117Q9H0C3 514 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 ZHX3Q9H4I2 956 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 TMEM206Q9H813 350 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 RC3H2Q9HBD1 1191 aaKnown RBP15.03■□□□□ -0
SHMT2-234ENST00000557703 GIT1Q9Y2X7 761 aa15.03■□□□□ -0
SHMT2-234ENST00000557703 UBE4BO95155 1302 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 INPPL1O15357 1258 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 PPP1R37O75864 691 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 KIF20AO95235 890 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 EHHADHQ08426 723 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 SNW1Q13573 536 aaKnown RBP15.02■□□□□ -0
SHMT2-234ENST00000557703 GLB1LQ6UWU2 654 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 SFR1Q86XK3 245 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 CLP1Q92989 425 aaKnown RBP15.02■□□□□ -0
SHMT2-234ENST00000557703 TSPAN18Q96SJ8 248 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 PTPRHQ9HD43 1115 aa15.02■□□□□ -0
SHMT2-234ENST00000557703 CGNQ9P2M7 1197 aaKnown RBP15.02■□□□□ -0
SHMT2-234ENST00000557703 MYO9BQ13459 2157 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
SHMT2-234ENST00000557703 CLDN3O15551 220 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
SHMT2-234ENST00000557703 UPP2O95045 317 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 RB1P06400 928 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 MCF2P10911 925 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 PROZP22891 400 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 AFMP43652 599 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-234ENST00000557703 COASYQ13057 564 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 KCNB1Q14721 858 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 UBXN11Q5T124 520 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 MPZL3Q6UWV2 235 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 TAS1R3Q7RTX0 852 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 FIBCD1Q8N539 461 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 GSDMAQ96QA5 445 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 ACCSQ96QU6 501 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 KIFC3Q9BVG8 833 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 PLVAPQ9BX97 442 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 GOLPH3LQ9H4A5 285 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 PDZD7Q9H5P4 517 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 POLD4Q9HCU8 107 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 PCDH10Q9P2E7 1040 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 STK39Q9UEW8 545 aa15.01□□□□□ -0.01
SHMT2-234ENST00000557703 HNRNPDLO14979 420 aaKnown RBP15□□□□□ -0.01
SHMT2-234ENST00000557703 B4GALT5O43286 388 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 SMC2O95347 1197 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 ITGA4P13612 1032 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
SHMT2-234ENST00000557703 MCL1Q07820 350 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 BTG3Q14201 252 aaPredicted RBP15□□□□□ -0.01
SHMT2-234ENST00000557703 FAM26FQ5R3K3 315 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 L1TD1Q5T7N2 865 aaKnown RBP15□□□□□ -0.01
SHMT2-234ENST00000557703 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 NT5DC1Q5TFE4 455 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 CPB2Q96IY4 423 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
SHMT2-234ENST00000557703 TCHPQ9BT92 498 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 RSAD1Q9HA92 442 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 TOPORSQ9NS56 1045 aaPredicted RBP15□□□□□ -0.01
SHMT2-234ENST00000557703 EXOC1Q9NV70 894 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 RMND1Q9NWS8 449 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 IPPQ9Y573 584 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 STYXL1Q9Y6J8 313 aa15□□□□□ -0.01
SHMT2-234ENST00000557703 RHOBTB3O94955 611 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 GCNT3O95395 438 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 ATF7P17544 494 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-234ENST00000557703 NMT1P30419 496 aaKnown RBP14.99□□□□□ -0.01
SHMT2-234ENST00000557703 LIG4P49917 911 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 ERVK-21P61565 698 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 DPYDQ12882 1025 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 CUL4BQ13620 913 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 LRRC43Q8N309 656 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 SMG8Q8ND04 991 aaKnown RBP14.99□□□□□ -0.01
SHMT2-234ENST00000557703 SPATA20Q8TB22 786 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 ZNF507Q8TCN5 953 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 URGCPQ8TCY9 931 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 STAMQ92783 540 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 BICD1Q96G01 975 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 CCDC94Q9BW85 323 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-234ENST00000557703 TARS2Q9BW92 718 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms