RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CSPP1Q1MSJ5 1256 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 MRPL10Q7Z7H8 261 aaKnown RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 GDPD5Q8WTR4 605 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 P2RX5Q93086 422 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
SLIRP-211ENST00000557623 PCDHB12Q9Y5F1 795 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 MTCH2Q9Y6C9 303 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
SLIRP-211ENST00000557623 A0A1B0GUA9 196 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 CARNS1A5YM72 827 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 K7ERI5 159 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 ACKR2O00590 384 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 N4BP3O15049 544 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 CUTAO60888 179 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 KRT18P05783 430 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 PLS3P13797 630 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 LAG3P18627 525 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 NPTX2P47972 431 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 SMTNP53814 917 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 MAPK7Q13164 816 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 MCM6Q14566 821 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 ATG2AQ2TAZ0 1938 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 SLC27A1Q6PCB7 646 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 DAW1Q8N136 415 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 ADPGKQ9BRR6 497 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 LMAN2LQ9H0V9 348 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 POLD4Q9HCU8 107 aa13.77□□□□□ -0.21
SLIRP-211ENST00000557623 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
SLIRP-211ENST00000557623 H0YCG3 227 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 B4GALT5O43286 388 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 ITGA4P13612 1032 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 LIG1P18858 919 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 SCP2P22307 547 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 DNM1Q05193 864 aaKnown RBP13.76□□□□□ -0.21
SLIRP-211ENST00000557623 RAD51AP2Q09MP3 1159 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-211ENST00000557623 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 LPPQ93052 612 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 MRPL38Q96DV4 380 aaKnown RBP13.76□□□□□ -0.21
SLIRP-211ENST00000557623 KIFC3Q9BVG8 833 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 CWH43Q9H720 699 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 ARHGAP28Q9P2N2 729 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 IPPQ9Y573 584 aa13.76□□□□□ -0.21
SLIRP-211ENST00000557623 CDH23Q9H251 3354 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 SFI1A8K8P3 1242 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 OFD1O75665 1012 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 FAM13AO94988 1023 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 NPTXRO95502 500 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 STAT6P42226 847 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 KRT85P78386 507 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 LONRF3Q496Y0 759 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
SLIRP-211ENST00000557623 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
SLIRP-211ENST00000557623 EIF2AQ9BY44 585 aaKnown RBP13.75□□□□□ -0.21
SLIRP-211ENST00000557623 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
SLIRP-211ENST00000557623 ZMYM2Q9UBW7 1377 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 NPHP3-ACAD11A0A0J9YXS1 232 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 SLC16A4O15374 487 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 TBCAO75347 108 aaKnown RBP13.74□□□□□ -0.21
SLIRP-211ENST00000557623 ABCD1P33897 745 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PPM1AP35813 382 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 ME1P48163 572 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 NUCB2P80303 420 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms