RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 UBE4AQ14139 1066 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 VPS72Q15906 364 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 DRICH1Q6PGQ1 229 aaPredicted RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 SEM1Q6ZVN7 128 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 SAMD3Q8N6K7 520 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 PIK3C3Q8NEB9 887 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 SVIPQ8NHG7 77 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 HDAC10Q969S8 669 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 CCDC136Q96JN2 1154 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 SLC38A3Q99624 504 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 ADI1Q9BV57 179 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 RLIMQ9NVW2 624 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 SIDT1Q9NXL6 827 aaKnown RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 L1RE1Q9UN81 338 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 G3BP2Q9UN86 482 aaKnown RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 CLCA2Q9UQC9 943 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 MROH6A6NGR9 719 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 CNOT4O95628 575 aaKnown RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 MT-CO1P00395 513 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 GYPEP15421 78 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 RAP1GAPP47736 663 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 HK3P52790 923 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 GJA9P57773 515 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 CD69Q07108 199 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 MORC3Q14149 939 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 RAB39AQ14964 217 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 UBE3CQ15386 1083 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 KCNA10Q16322 511 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 LONRF3Q496Y0 759 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 TRMT10BQ6PF06 316 aaKnown RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 ATG14Q6ZNE5 492 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 ZNF572Q7Z3I7 529 aaPredicted RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 ADGRE4PQ86SQ3 457 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 PNMA8AQ86V59 439 aaPredicted RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 IL17RDQ8NFM7 739 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 WDR48Q8TAF3 677 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 NRG4Q8WWG1 115 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 RIN2Q8WYP3 895 aaPredicted RBP2.24□□□□□ -2.05
HIF1A-212ENST00000557538 CLIP3Q96DZ5 547 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 DIRC2Q96SL1 478 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 MPHOSPH9Q99550 1183 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 GPRC5DQ9NZD1 345 aa2.24□□□□□ -2.05
HIF1A-212ENST00000557538 FAM227AF5H4B4 570 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 MATN2O00339 956 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DAPK3O43293 454 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PCDH8O95206 1070 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ANXA1P04083 346 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 FSTL1Q12841 308 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 MTM1Q13496 603 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 SEPT2Q15019 361 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LRRC41Q15345 812 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DACT2Q5SW24 774 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 OGFOD2Q6N063 350 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LARP4Q71RC2 724 aaKnown RBP eCLIP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 FRMD5Q7Z6J6 570 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 CMTM4Q8IZR5 234 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DIS3LQ8TF46 1054 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ZBTB8AQ96BR9 441 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LCORQ96JN0 433 aaPredicted RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PWWP2AQ96N64 755 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 SAMD11Q96NU1 681 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 WDCPQ9H6R7 721 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 BARX1Q9HBU1 254 aaPredicted RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ANLNQ9NQW6 1124 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 IP6K2Q9UHH9 426 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DPP7Q9UHL4 492 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 CNOT6Q9ULM6 557 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DBX1A6NMT0 343 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ADCY6O43306 1168 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 B3GALT2O43825 422 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 CLEC2LP0C7M8 214 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PI3P19957 117 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 FAM193AP78312 1265 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 TLE1Q04724 770 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 FAM47AQ5JRC9 791 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PDZD4Q76G19 769 aaPredicted RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 OVCH2Q7RTZ1 564 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 APBB1IPQ7Z5R6 666 aaPredicted RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ZDHHC14Q8IZN3 488 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 MIER2Q8N344 545 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 MSLNLQ96KJ4 702 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 SSBP3Q9BWW4 388 aaPredicted RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 L2HGDHQ9H9P8 463 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 SERPINB13Q9UIV8 391 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LIMCH1Q9UPQ0 1083 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 SIK3Q9Y2K2 1263 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 IL33O95760 270 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LPLP06858 475 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 TYRP14679 529 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 IL2RBP14784 551 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 RPS19P39019 145 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 AFF3P51826 1226 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 USP14P54578 494 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PCOLCEQ15113 449 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 LMBR1LQ6UX01 489 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 Q6ZVL8 140 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 C3orf20Q8ND61 904 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 PJA1Q8NG27 643 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 IFI44Q8TCB0 444 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ANKS1AQ92625 1134 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms