RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PKP1Q13835 747 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
TUBB3-214ENST00000557490 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 MRPL10Q7Z7H8 261 aaKnown RBP17.5■□□□□ 0.39
TUBB3-214ENST00000557490 GPBP1Q86WP2 473 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 HACE1Q8IYU2 909 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 DAW1Q8N136 415 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 RAD54LQ92698 747 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 P2RX5Q93086 422 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 MRPL38Q96DV4 380 aaKnown RBP17.5■□□□□ 0.39
TUBB3-214ENST00000557490 PHOX2BQ99453 314 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 KIFC3Q9BVG8 833 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 LMAN2LQ9H0V9 348 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 KMT5AQ9NQR1 393 aa17.5■□□□□ 0.39
TUBB3-214ENST00000557490 PHLPP2Q6ZVD8 1323 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 CNTNAP2Q9UHC6 1331 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 ACKR2O00590 384 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 PPP6R2O75170 966 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 ITGA4P13612 1032 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
TUBB3-214ENST00000557490 NPTX2P47972 431 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 MAPK7Q13164 816 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 NOMO2Q5JPE7 1267 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 USP49Q70CQ1 688 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 URGCPQ8TCY9 931 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
TUBB3-214ENST00000557490 CCDC113Q9H0I3 377 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 CWH43Q9H720 699 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 UBN1Q9NPG3 1134 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-214ENST00000557490 INPP5FQ9Y2H2 1132 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
TUBB3-214ENST00000557490 IPPQ9Y573 584 aa17.49■□□□□ 0.39
TUBB3-214ENST00000557490 ZFHX2Q9C0A1 2572 aaPredicted RBP17.48■□□□□ 0.39
TUBB3-214ENST00000557490 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 K7ERI5 159 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 N4BP3O15049 544 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 OFD1O75665 1012 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 NPTXRO95502 500 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 KRT18P05783 430 aaKnown RBP17.48■□□□□ 0.39
TUBB3-214ENST00000557490 PLS3P13797 630 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 DDIT3P35638 169 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 SMTNP53814 917 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 MCM6Q14566 821 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 AGMOQ6ZNB7 445 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 LRRC55Q6ZSA7 311 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 THNSL1Q8IYQ7 743 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 KLHL23Q8NBE8 558 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 COLGALT1Q8NBJ5 622 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
TUBB3-214ENST00000557490 ZNF558Q96NG5 402 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 RSAD1Q9HA92 442 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 HCSTQ9UBK5 93 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 PLAGL2Q9UPG8 496 aa17.48■□□□□ 0.39
TUBB3-214ENST00000557490 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 GRM6O15303 877 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
TUBB3-214ENST00000557490 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 CDR2LQ86X02 465 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-214ENST00000557490 SMG8Q8ND04 991 aaKnown RBP17.47■□□□□ 0.39
TUBB3-214ENST00000557490 KCNG4Q8TDN1 519 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 LRRC15Q8TF66 581 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 SPIRE2Q8WWL2 714 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 ADPGKQ9BRR6 497 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-214ENST00000557490 ALG13Q9NP73 1137 aaKnown RBP17.47■□□□□ 0.39
TUBB3-214ENST00000557490 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
TUBB3-214ENST00000557490 CACNA1HO95180 2353 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 RALGAPA2Q2PPJ7 1873 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 SLC16A4O15374 487 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 DCXO43602 365 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 CUTAO60888 179 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 FAM13AO94988 1023 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 BRD1O95696 1058 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 ITGB1P05556 798 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 IL9P15248 144 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-214ENST00000557490 LEXMQ3ZCV2 418 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 KCNT2Q6UVM3 1135 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 APBB1IPQ7Z5R6 666 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-214ENST00000557490 SPPL3Q8TCT6 385 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 REEP2Q9BRK0 252 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 NTPCRQ9BSD7 190 aaKnown RBP17.46■□□□□ 0.39
TUBB3-214ENST00000557490 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 TBC1D13Q9NVG8 400 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 LARSQ9P2J5 1176 aaKnown RBP17.46■□□□□ 0.39
TUBB3-214ENST00000557490 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.39
TUBB3-214ENST00000557490 CARNS1A5YM72 827 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms