RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM184AQ8NB25 1140 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 MCPH1Q8NEM0 835 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 ZSCAN31Q96LW9 406 aaPredicted RBP15.73■□□□□ 0.11
SNX6-210ENST00000557341 NECTIN4Q96NY8 510 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 CSRNP2Q9H175 543 aa15.73■□□□□ 0.11
SNX6-210ENST00000557341 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
SNX6-210ENST00000557341 PDCD11Q14690 1871 aaKnown RBP15.73■□□□□ 0.11
SNX6-210ENST00000557341 LRRIQ4A6NIV6 560 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 INPPL1O15357 1258 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 MED24O75448 989 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 SPATA31C1P0DKV0 1188 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 ARF4P18085 180 aaPredicted RBP15.72■□□□□ 0.11
SNX6-210ENST00000557341 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 AMHR2Q16671 573 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 PPFIBP1Q86W92 1011 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 CATSPER3Q86XQ3 398 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 FBXO18Q8NFZ0 1043 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 VN1R3Q9BXE9 311 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 ADAM7Q9H2U9 754 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
SNX6-210ENST00000557341 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 NR2E1Q9Y466 385 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 HES2Q9Y543 173 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 ZMYM2Q9UBW7 1377 aa15.72■□□□□ 0.11
SNX6-210ENST00000557341 VWA8A3KMH1 1905 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 ARL5CA6NH57 179 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 NRP1O14786 923 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 ALDH2P05091 517 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 SP100P23497 879 aaPredicted RBP15.71■□□□□ 0.11
SNX6-210ENST00000557341 RPA1P27694 616 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 MTHFRP42898 656 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 RBM25P49756 843 aaKnown RBP15.71■□□□□ 0.11
SNX6-210ENST00000557341 ZXDAP98168 799 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 TTC38Q5R3I4 469 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 SLC27A1Q6PCB7 646 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 POTEGQ6S5H5 508 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 NOSTRINQ8IVI9 506 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 ZBTB8OSQ8IWT0 167 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 MFSD14AQ96MC6 490 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 RIPOR3Q96MK2 946 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 GAD1Q99259 594 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 POLR3CQ9BUI4 534 aaPredicted RBP15.71■□□□□ 0.11
SNX6-210ENST00000557341 APOL6Q9BWW8 343 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 EMILIN2Q9BXX0 1053 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 NXF3Q9H4D5 531 aaKnown RBP15.71■□□□□ 0.11
SNX6-210ENST00000557341 POMKQ9H5K3 350 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 GPRC5CQ9NQ84 441 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 CDH22Q9UJ99 828 aa15.71■□□□□ 0.11
SNX6-210ENST00000557341 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
SNX6-210ENST00000557341 A0A087WWV3 80 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 B4GALT5O43286 388 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNX6-210ENST00000557341 URODP06132 367 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 EPCAMP16422 314 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 OR1G1P47890 313 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 TRAPPC10P48553 1259 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 SCNN1GP51170 649 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 ZNF174Q15697 407 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 C8orf34Q49A92 452 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 RARS2Q5T160 578 aaKnown RBP15.7■□□□□ 0.1
SNX6-210ENST00000557341 CDCA2Q69YH5 1023 aaPredicted RBP15.7■□□□□ 0.1
SNX6-210ENST00000557341 KIAA1841Q6NSI8 718 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 TRIM67Q6ZTA4 783 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 COLGALT2Q8IYK4 626 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 SLC22A17Q8WUG5 538 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 ZFP42Q96MM3 310 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 KIF2CQ99661 725 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 HERC2P3Q9BVR0 1158 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 KCNH6Q9H252 994 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 MRPL17Q9NRX2 175 aaKnown RBP15.7■□□□□ 0.1
SNX6-210ENST00000557341 PRMT7Q9NVM4 692 aaPredicted RBP15.7■□□□□ 0.1
SNX6-210ENST00000557341 MARCH5Q9NX47 278 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 GIT1Q9Y2X7 761 aa15.7■□□□□ 0.1
SNX6-210ENST00000557341 PRG3Q9Y2Y8 225 aaPredicted RBP15.7■□□□□ 0.1
SNX6-210ENST00000557341 TMEM221A6NGB7 291 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 M0R296 226 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 NR1I2O75469 434 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 NPTXRO95502 500 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 SOD2P04179 222 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 MUTP22033 750 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 DSC1Q08554 894 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 SIGLEC14Q08ET2 396 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 BMP8AQ7Z5Y6 402 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 ZBTB33Q86T24 672 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 CABP7Q86V35 215 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 C2orf40Q9H1Z8 148 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 SFXN1Q9H9B4 322 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 ZDBF2Q9HCK1 2354 aa15.69■□□□□ 0.1
SNX6-210ENST00000557341 DOCK8Q8NF50 2099 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms