RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SERPINB13Q9UIV8 391 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 MEFVO15553 781 aaPredicted RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 KCNA2P16389 499 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 RGS2P41220 211 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 DDB1Q16531 1140 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 DKK3Q9UBP4 350 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 KDM5DQ9BY66 1539 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 BYSLQ13895 437 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ARMC4Q5T2S8 1044 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CALML6Q8TD86 181 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ARMC7Q9H6L4 198 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 LMBRD1Q9NUN5 540 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 MAPRE1Q15691 268 aaKnown RBP9.32□□□□□ -0.92
SYNE3-205ENST00000557275 RBBP7Q16576 425 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 BBS9Q3SYG4 887 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 SPDYE7PQ495Y7 208 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 USHBP1Q8N6Y0 703 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 ZFATQ9P243 1243 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CDH16O75309 829 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 S100A6P06703 90 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 MLNP12872 115 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 PRAMEP78395 509 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 CAMK1DQ8IU85 385 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 HIPK4Q8NE63 616 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 HAVCR1Q96D42 359 aa9.32□□□□□ -0.92
SYNE3-205ENST00000557275 EYA2O00167 538 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TUBA4AP68366 448 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 HSPH1Q92598 858 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SH3KBP1Q96B97 665 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 NARS2Q96I59 477 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TFCP2L1Q9NZI6 479 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 DDX39AO00148 427 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MARK3P27448 753 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 RRM2P31350 389 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TIMM50Q3ZCQ8 353 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PDCD6IPQ8WUM4 868 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 P2RX5Q93086 422 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 UBXN6Q9BZV1 441 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PCDHA5Q9Y5H7 936 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 FGGP02679 453 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 COPB2P35606 906 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MXI1P50539 228 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 RNF26Q9BY78 433 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 CXorf56Q9H5V9 222 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 C19orf44Q9H6X5 657 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 RIC8BQ9NVN3 520 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ADAT2Q7Z6V5 191 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 CASS4Q9NQ75 786 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SPATA2Q9UM82 520 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ADGRL1O94910 1474 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SLCO1A2P46721 670 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PUDPQ08623 228 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ENOSF1Q7L5Y1 443 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ZBTB38Q8NAP3 1195 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TAF4O00268 1085 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 IDH3BO43837 385 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SERPINB9P50453 376 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 THEM5Q8N1Q8 247 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 USP33Q8TEY7 942 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC126Q96EE4 140 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ABCC1P33527 1531 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ARL6IP4Q66PJ3 421 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PARD6BQ9BYG5 372 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TOPORSQ9NS56 1045 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MTO1Q9Y2Z2 717 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TTKP33981 857 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 HABP4Q5JVS0 413 aaKnown RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 DDIASQ8IXT1 998 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 TEX46H3BTG2 121 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 BMP10O95393 424 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 IFNA14P01570 189 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 APBB2Q92870 758 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PSMD14O00487 310 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 PFKFB2O60825 505 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 AGTP01019 485 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ARHGDIBP52566 201 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 COX10Q12887 443 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MAEAQ7L5Y9 396 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 CDKL3Q8IVW4 592 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
SYNE3-205ENST00000557275 KLHL25Q9H0H3 589 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 FANCLQ9NW38 375 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
SYNE3-205ENST00000557275 MAGEA13PA6NCF6 341 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CYTH3O43739 400 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms