RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 ZNF274Q96GC6 653 aaPredicted RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 FAM193BQ96PV7 902 aaPredicted RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 WDR6Q9NNW5 1121 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 MARCH5Q9NX47 278 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 WNT16Q9UBV4 365 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
RDH11-209ENST00000557273 REC8O95072 547 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 NPEPPSP55786 919 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 POU5F1BQ06416 359 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 INF2Q27J81 1249 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 KIAA0319Q5VV43 1072 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 FRMD5Q7Z6J6 570 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
RDH11-209ENST00000557273 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 PRPF31Q8WWY3 499 aaKnown RBP11.3□□□□□ -0.6
RDH11-209ENST00000557273 CEP170P1Q96L14 293 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 WRAP73Q9P2S5 460 aaPredicted RBP11.3□□□□□ -0.6
RDH11-209ENST00000557273 CLUHO75153 1309 aa11.3□□□□□ -0.6
RDH11-209ENST00000557273 ZNF292O60281 2723 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 CACNA1IQ9P0X4 2223 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 CPLX1O14810 134 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 TEX28O15482 410 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 PI15O43692 258 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 GLUD1P00367 558 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
RDH11-209ENST00000557273 GLUD2P49448 558 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 PTENP60484 403 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 DSG1Q02413 1049 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 MXD4Q14582 209 aaPredicted RBP11.29□□□□□ -0.6
RDH11-209ENST00000557273 EMC2Q15006 297 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 EPHA7Q15375 998 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
RDH11-209ENST00000557273 ERMP1Q7Z2K6 904 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 NEK8Q86SG6 692 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
RDH11-209ENST00000557273 DTWD2Q8NBA8 298 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 RNF149Q8NC42 400 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 HAS1Q92839 578 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
RDH11-209ENST00000557273 LXNQ9BS40 222 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 TM6SF1Q9BZW5 370 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 SEMA4AQ9H3S1 761 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 CHST7Q9NS84 486 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 IPPQ9Y573 584 aa11.29□□□□□ -0.6
RDH11-209ENST00000557273 CCDC195A0A1B0GUA6 201 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ARL5CA6NH57 179 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 TSPAN1O60635 241 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ERLIN2O94905 339 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 LYPLA2O95372 231 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 POMCP01189 267 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
RDH11-209ENST00000557273 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 SRFP11831 508 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ITGA4P13612 1032 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 AK2P54819 239 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ANGPT1Q15389 498 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 NOTUMQ6P988 496 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 SIX5Q8N196 739 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ZNF707Q96C28 371 aaPredicted RBP11.28□□□□□ -0.6
RDH11-209ENST00000557273 GAD1Q99259 594 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 MTRQ99707 1265 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 NFKBIZQ9BYH8 718 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 ZSWIM4Q9H7M6 989 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 XPNPEP1Q9NQW7 623 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.28□□□□□ -0.6
RDH11-209ENST00000557273 ZDHHC7Q9NXF8 308 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
RDH11-209ENST00000557273 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 GIT1Q9Y2X7 761 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
RDH11-209ENST00000557273 STK36Q9NRP7 1315 aa11.28□□□□□ -0.6
RDH11-209ENST00000557273 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.6
RDH11-209ENST00000557273 MYH15Q9Y2K3 1946 aa11.27□□□□□ -0.6
RDH11-209ENST00000557273 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 KRBA1A5PL33 1030 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 ANHXE9PGG2 379 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 NR1I2O75469 434 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 MLH1P40692 756 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 CREMQ03060 361 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 AMHR2Q16671 573 aa11.27□□□□□ -0.61
RDH11-209ENST00000557273 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms