RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CPB2Q96IY4 423 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 KLHL5Q96PQ7 755 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 EMILIN2Q9BXX0 1053 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 NFKBIZQ9BYH8 718 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 TSHZ2Q9NRE2 1034 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 PIEZO1Q92508 2521 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 ARL5CA6NH57 179 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 INPPL1O15357 1258 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 LILRB3O75022 631 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 WEE2P0C1S8 567 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 GLRA2P23416 452 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 KLRC2P26717 231 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 MBTD1Q05BQ5 628 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 KANK3Q6NY19 840 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 CABP7Q86V35 215 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 COLGALT2Q8IYK4 626 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 ASIC4Q96FT7 647 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 GAD1Q99259 594 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 TMEM60Q9H2L4 133 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
TUBB3-213ENST00000557262 LIMCH1Q9UPQ0 1083 aa17.65■□□□□ 0.42
TUBB3-213ENST00000557262 C2CD4DB7Z1M9 353 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 SEC24BO95487 1268 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 SSBP05455 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
TUBB3-213ENST00000557262 CNPP09543 421 aaKnown RBP17.64■□□□□ 0.41
TUBB3-213ENST00000557262 SPATA31C1P0DKV0 1188 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 ARF4P18085 180 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-213ENST00000557262 MCM7P33993 719 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 AMHR2Q16671 573 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 KIAA1841Q6NSI8 718 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 CATSPER3Q86XQ3 398 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 HACE1Q8IYU2 909 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 KREMEN2Q8NCW0 462 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 PRRX2Q99811 253 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 TRIM6Q9C030 488 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-213ENST00000557262 TUFT1Q9NNX1 390 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 MIOSQ9NXC5 875 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 DBR1Q9UK59 544 aaKnown RBP17.64■□□□□ 0.41
TUBB3-213ENST00000557262 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 GIT1Q9Y2X7 761 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 HES2Q9Y543 173 aa17.64■□□□□ 0.41
TUBB3-213ENST00000557262 A0A1B0GUA9 196 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 POTEMA6NI47 508 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 NR1I2O75469 434 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 SOD2P04179 222 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 MLH1P40692 756 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 OR1G1P47890 313 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 CLCN4P51793 760 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 DSC1Q08554 894 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 IER5LQ5T953 404 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 TMC5Q6UXY8 1006 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 NACC1Q96RE7 527 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 POLR3FQ9H1D9 316 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-213ENST00000557262 SORCS3Q9UPU3 1222 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 USTQ9Y2C2 406 aa17.63■□□□□ 0.41
TUBB3-213ENST00000557262 PRG3Q9Y2Y8 225 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-213ENST00000557262 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
TUBB3-213ENST00000557262 SCNN1GP51170 649 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 SLC27A1Q6PCB7 646 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 TAS1R1Q7RTX1 841 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 GPR149Q86SP6 731 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 UBALD2Q8IYN6 164 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 C8orf76Q96K31 380 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 ZFP42Q96MM3 310 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 LLPHQ9BRT6 129 aaKnown RBP17.62■□□□□ 0.41
TUBB3-213ENST00000557262 POLR3CQ9BUI4 534 aaPredicted RBP17.62■□□□□ 0.41
TUBB3-213ENST00000557262 HERC2P3Q9BVR0 1158 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 COLEC11Q9BWP8 271 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 MARCH5Q9NX47 278 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 LIMD1Q9UGP4 676 aa17.62■□□□□ 0.41
TUBB3-213ENST00000557262 ARID2Q68CP9 1835 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 LRRIQ4A6NIV6 560 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 C2CD2LO14523 706 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 B4GALT5O43286 388 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 MED24O75448 989 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 EFEMP2O95967 443 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 URODP06132 367 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 MRE11P49959 708 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-213ENST00000557262 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 ZNF174Q15697 407 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 KIAA0319Q5VV43 1072 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 CDR2LQ86X02 465 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-213ENST00000557262 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 TDRD5Q8NAT2 981 aaKnown RBP17.61■□□□□ 0.41
TUBB3-213ENST00000557262 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
TUBB3-213ENST00000557262 FOXP1Q9H334 677 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-213ENST00000557262 NXF3Q9H4D5 531 aaKnown RBP17.61■□□□□ 0.41
TUBB3-213ENST00000557262 GPRC5CQ9NQ84 441 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms