RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ASIC4Q96FT7 647 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 ZNF558Q96NG5 402 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 NECTIN4Q96NY8 510 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 RIT2Q99578 217 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 TRAIPQ9BWF2 469 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 CHST12Q9NRB3 414 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 DACT1Q9NYF0 836 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 SPG21Q9NZD8 308 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 NR2E1Q9Y466 385 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 PLXNA4Q9HCM2 1894 aa9.78□□□□□ -0.84
VRK1-206ENST00000557222 NID2Q14112 1375 aa9.77□□□□□ -0.84
VRK1-206ENST00000557222 CFAP54Q96N23 3096 aa9.77□□□□□ -0.84
VRK1-206ENST00000557222 VTNP04004 478 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 FGFR1P11362 822 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
VRK1-206ENST00000557222 SFNP31947 248 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 TECP42680 631 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 METAP2P50579 478 aaKnown RBP eCLIP9.77□□□□□ -0.85
VRK1-206ENST00000557222 JAK3P52333 1124 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 NLRP11P59045 1033 aaKnown RBP9.77□□□□□ -0.85
VRK1-206ENST00000557222 GIT2Q14161 759 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 LRRC55Q6ZSA7 311 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 TMC7Q7Z402 723 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 UBALD2Q8IYN6 164 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 MRPL43Q8N983 215 aaKnown RBP9.77□□□□□ -0.85
VRK1-206ENST00000557222 PRSS33Q8NF86 280 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 RDM1Q8NG50 284 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 KCNB2Q92953 911 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 RPGRIP1Q96KN7 1286 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 TCF25Q9BQ70 676 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
VRK1-206ENST00000557222 C22orf23Q9BZE7 217 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 ENTPD7Q9NQZ7 604 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 DISC1Q9NRI5 854 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 RNF19AQ9NV58 838 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 GABBR1Q9UBS5 961 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 STK39Q9UEW8 545 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 AKT3Q9Y243 479 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 WDR87Q6ZQQ6 2873 aa9.77□□□□□ -0.85
VRK1-206ENST00000557222 SKIP12755 728 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 DARSP14868 501 aaKnown RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 AVPR2P30518 371 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 RNF144AP50876 292 aaPredicted RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 GPC3P51654 580 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 CLCN3P51790 818 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 POLGP54098 1239 aaPredicted RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 FGD1P98174 961 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 AKAP17AQ02040 695 aaKnown RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 MCM6Q14566 821 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 ADCK5Q3MIX3 580 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 PRR16Q569H4 304 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 PLPP4Q5VZY2 271 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 CES5AQ6NT32 575 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 FAM177A1Q8N128 213 aaPredicted RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 SLC39A11Q8N1S5 342 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 LENG9Q96B70 501 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 RNF26Q9BY78 433 aaPredicted RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 INO80BQ9C086 356 aaPredicted RBP9.76□□□□□ -0.85
VRK1-206ENST00000557222 ADAM7Q9H2U9 754 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 SH3GLB2Q9NR46 395 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 SAMM50Q9Y512 469 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 IRAK3Q9Y616 596 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 SPTBN4Q9H254 2564 aa9.76□□□□□ -0.85
VRK1-206ENST00000557222 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 C2orf71A6NGG8 1288 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 HIDE1A8MVS5 230 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 ZNF862O60290 1169 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 IBSPP21815 317 aaPredicted RBP9.75□□□□□ -0.85
VRK1-206ENST00000557222 MTHFRP42898 656 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 ALDH7A1P49419 539 aaKnown RBP9.75□□□□□ -0.85
VRK1-206ENST00000557222 TBC1D8BQ0IIM8 1120 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 TCF15Q12870 199 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 TARBP2Q15633 366 aaKnown RBP9.75□□□□□ -0.85
VRK1-206ENST00000557222 CLLU1OSQ5K130 101 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 SLC5A5Q92911 643 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 TCEANC2Q96MN5 208 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 NIFKQ9BYG3 293 aaKnown RBP9.75□□□□□ -0.85
VRK1-206ENST00000557222 AGXT2Q9BYV1 514 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 GCOM2Q9BZD3 368 aaPredicted RBP9.75□□□□□ -0.85
VRK1-206ENST00000557222 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 FAM186AA6NE01 2351 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 MYO10Q9HD67 2058 aa9.75□□□□□ -0.85
VRK1-206ENST00000557222 CYP3A7-CYP3A51PA0A087WV96 503 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 IGKV6-21A0A0C4DH24 114 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 MEN1O00255 615 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 MSH4O15457 936 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 GAS7O60861 476 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 ZNF623O75123 536 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 CDC45O75419 566 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 IFNAR1P17181 557 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 CYP3A7P24462 503 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 ABL2P42684 1182 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 DNM2P50570 870 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms