RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KYQ8NBH2 561 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 RBBP8NLQ8NC74 664 aaPredicted RBP5.18□□□□□ -1.58
SRP54-212ENST00000556992 WDR66Q8TBY9 1149 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 PLEKHO2Q8TD55 490 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 KLHL6Q8WZ60 621 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 DVL3Q92997 716 aaPredicted RBP5.18□□□□□ -1.58
SRP54-212ENST00000556992 GTF3C6Q969F1 213 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 NAPBQ9H115 298 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 GZF1Q9H116 711 aaPredicted RBP5.18□□□□□ -1.58
SRP54-212ENST00000556992 LMBRD1Q9NUN5 540 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 APEX2Q9UBZ4 518 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 ABCF2Q9UG63 623 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 SLC4A4Q9Y6R1 1079 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 UBR2Q8IWV8 1755 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 ZMYM6O95789 1325 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 XDHP47989 1333 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 C5P01031 1676 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 PLCH1Q4KWH8 1693 aa5.18□□□□□ -1.58
SRP54-212ENST00000556992 GSG1L2A8MUP6 293 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 H3BQV1 296 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 FOXP2O15409 715 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 NPHS1O60500 1241 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 B4GALT3O60512 393 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 CDKL5O76039 1030 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 LETM1O95202 739 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 LARGE1O95461 756 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 SLC3A2P08195 630 aaKnown RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 PCP11498 1178 aaKnown RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 PLS3P13797 630 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 TACR2P21452 398 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 FPR2P25090 351 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 ALDH1B1P30837 517 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 ZNF76P36508 570 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 TDO2P48775 406 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 HAND2P61296 217 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 RACK1P63244 317 aaKnown RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 SCRN1Q12765 414 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 STK3Q13188 491 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 SART3Q15020 963 aaKnown RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 PPP2R5BQ15173 497 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 AKNAD1Q5T1N1 836 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 ATL3Q6DD88 541 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 NAA16Q6N069 864 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 ZNF585AQ6P3V2 769 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 CPLX2Q6PUV4 134 aaKnown RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 GLB1LQ6UWU2 654 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 SYNE3Q6ZMZ3 975 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 CERS3Q8IU89 383 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 MB21D2Q8IYB1 491 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 TTC9BQ8N6N2 239 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 SYAP1Q96A49 352 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 TCEANC2Q96MN5 208 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 PTPN18Q99952 460 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 MRIQ9BWK5 157 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 ZSCAN16Q9H4T2 348 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 GINM1Q9NU53 330 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 PODXL2Q9NZ53 605 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.17□□□□□ -1.58
SRP54-212ENST00000556992 PPP4R1LQ9P1A2 415 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 ANAPC4Q9UJX5 808 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 NAP1L2Q9ULW6 460 aaPredicted RBP5.17□□□□□ -1.58
SRP54-212ENST00000556992 MTMR6Q9Y217 621 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 NWD2Q9ULI1 1742 aa5.17□□□□□ -1.58
SRP54-212ENST00000556992 CCDC196A0A1B0GTZ2 297 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 ERICH2A1L162 156 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 VPS37CA5D8V6 355 aaPredicted RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 POLRMTO00411 1230 aaKnown RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 CPLX1O14810 134 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 PPM1BO75688 479 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 KCNH1O95259 989 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 BAG3O95817 575 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 THBDP07204 575 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 NPR1P16066 1061 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 ERCC3P19447 782 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 LIFRP42702 1097 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 MRE11P49959 708 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 FANCCQ00597 558 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 SLC7A5Q01650 507 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 MECOMQ03112 1051 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 KIAA2012Q0VF49 1180 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 FAM26FQ5R3K3 315 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 PRR31Q5SQ13 230 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 BORAQ6PGQ7 559 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 COL23A1Q86Y22 540 aaPredicted RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 DCP2Q8IU60 420 aaKnown RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 ARHGEF39Q8N4T4 335 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 MIGA1Q8NAN2 632 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 TDRD7Q8NHU6 1098 aaKnown RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 IGDCC4Q8TDY8 1250 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 ESR2Q92731 530 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 NOL10Q9BSC4 688 aaKnown RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 CRNKL1Q9BZJ0 848 aaKnown RBP5.16□□□□□ -1.58
SRP54-212ENST00000556992 ATP8A2Q9NTI2 1148 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 CFAP45Q9UL16 551 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 TOGARAM1Q9Y4F4 1720 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
SRP54-212ENST00000556992 NRAPQ86VF7 1730 aa5.15□□□□□ -1.58
SRP54-212ENST00000556992 LAMB4A4D0S4 1761 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms