RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CYFIP1Q7L576 1253 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 NIPA1Q7RTP0 329 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 KCNK18Q7Z418 384 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 CABP7Q86V35 215 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 TEX2Q8IWB9 1127 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 ETFBKMTQ8IXQ9 262 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 IGSF22Q8N9C0 903 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 USP38Q8NB14 1042 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 SNX29Q8TEQ0 813 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 PPP1R13LQ8WUF5 828 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 FERMT2Q96AC1 680 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 DHX58Q96C10 678 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 GPRASP2Q96D09 838 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 DYDC2Q96IM9 177 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
ATXN3-244ENST00000556898 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 NAP1L4Q99733 375 aaKnown RBP5.94□□□□□ -1.46
ATXN3-244ENST00000556898 TEKT3Q9BXF9 490 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 MAF1Q9H063 256 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 DACT1Q9NYF0 836 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 RGL1Q9NZL6 768 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 TMEM63CQ9P1W3 806 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 ZFATQ9P243 1243 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 STIM2Q9P246 746 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 WRAP73Q9P2S5 460 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-244ENST00000556898 LRWD1Q9UFC0 647 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 DDX41Q9UJV9 622 aaKnown RBP5.94□□□□□ -1.46
ATXN3-244ENST00000556898 PCDHA12Q9UN75 941 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 HPSEQ9Y251 543 aa5.94□□□□□ -1.46
ATXN3-244ENST00000556898 TCHHQ07283 1943 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 ZNF236Q9UL36 1845 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 FAM237AA0A1B0GTK4 181 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 GSTTP1A0A1W2PQM5 241 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 RBM47A0AV96 593 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TMEM150BA6NC51 233 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 ZBTB39O15060 712 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TBX3O15119 743 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 POLR2DO15514 142 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 GAS7O60861 476 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 ZNF202O95125 648 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 GGPS1O95749 300 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 IGHA2P01877 340 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TXNP10599 105 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 CPB1P15086 417 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 PLCG1P19174 1290 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 NOS3P29474 1203 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 LONP1P36776 959 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 CCT6AP40227 531 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 PSMC6P62333 389 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 SETQ01105 290 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TLE2Q04725 743 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 CCINQ13939 588 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 DHX8Q14562 1220 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 SNX17Q15036 470 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TMEM266Q2M3C6 531 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 LONRF3Q496Y0 759 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 NAALADL2Q58DX5 795 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 OLFML2BQ68BL8 750 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 XRRA1Q6P2D8 792 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 CCDC62Q6P9F0 684 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TRMT1LQ7Z2T5 733 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 MIER3Q7Z3K6 550 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 CATSPER3Q86XQ3 398 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 FAM20AQ96MK3 541 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 EIF2AK1Q9BQI3 630 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 LPIN3Q9BQK8 851 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 SH2D3AQ9BRG2 576 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 GZF1Q9H116 711 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 POLD4Q9HCU8 107 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 KCNH3Q9ULD8 1083 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 DIS3Q9Y2L1 958 aaKnown RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 MORC2Q9Y6X9 1032 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-244ENST00000556898 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
ATXN3-244ENST00000556898 NPHP3-ACAD11A0A0J9YXS1 232 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 MYADML2A6NDP7 307 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 B4DLN1 442 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 SEPT4O43236 478 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 STAM2O75886 525 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 MICAL2O94851 1124 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 SLITRK3O94933 977 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 RAG1P15918 1043 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 UBA7P41226 1012 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 SYKP43405 635 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 AFMP43652 599 aa5.92□□□□□ -1.46
ATXN3-244ENST00000556898 SERPINB4P48594 390 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms