RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
HIF1A-209ENST00000556827 CROCC2H7BZ55 1655 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 EYA4O95677 639 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 NFYCQ13952 458 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 TBR1Q16650 682 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 USP30Q70CQ3 517 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 USP51Q70EK9 711 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 BRINP3Q76B58 766 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 POLNQ7Z5Q5 900 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 TTC1Q99614 292 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 PLA2G12BQ9BX93 195 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 SCAND2PQ9GZW5 306 aaPredicted RBP6.94□□□□□ -1.3
HIF1A-209ENST00000556827 OR10A2Q9H208 303 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 NWD1Q149M9 1564 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 ROCK1Q13464 1354 aa6.94□□□□□ -1.3
HIF1A-209ENST00000556827 FZD7O75084 574 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 CYP17A1P05093 508 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 ACO1P21399 889 aaKnown RBP6.93□□□□□ -1.3
HIF1A-209ENST00000556827 FNTBP49356 437 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 STAT5BP51692 787 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 SMAD3P84022 425 aaKnown RBP6.93□□□□□ -1.3
HIF1A-209ENST00000556827 AMPD3Q01432 767 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 MAP3K12Q12852 859 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 ATP13A4Q4VNC1 1196 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 TMEM200BQ69YZ2 307 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 OR14K1Q8NGZ2 314 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 ZNF341Q9BYN7 854 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 SLC30A1Q9Y6M5 507 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 AFF2P51816 1311 aa6.93□□□□□ -1.3
HIF1A-209ENST00000556827 CFAP65Q6ZU64 1925 aaKnown RBP6.93□□□□□ -1.3
HIF1A-209ENST00000556827 MATN2O00339 956 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 APEX1P27695 318 aaKnown RBP6.92□□□□□ -1.3
HIF1A-209ENST00000556827 RPS19P39019 145 aaKnown RBP6.92□□□□□ -1.3
HIF1A-209ENST00000556827 SLC6A3Q01959 620 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 STAT4Q14765 748 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 NRN1LQ496H8 165 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 TRIM68Q6AZZ1 485 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 DDX42Q86XP3 938 aaKnown RBP eCLIP6.92□□□□□ -1.3
HIF1A-209ENST00000556827 Q8N1X5 172 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 FAM89AQ96GI7 184 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 PHLPP1O60346 1717 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 DCCP43146 1447 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 ADAMTS13Q76LX8 1427 aa6.92□□□□□ -1.3
HIF1A-209ENST00000556827 TRPM2O94759 1503 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 DIP2AQ14689 1571 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 UBA6A0AVT1 1052 aaPredicted RBP6.91□□□□□ -1.3
HIF1A-209ENST00000556827 RGS3P49796 1198 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 RBM6P78332 1123 aaKnown RBP6.91□□□□□ -1.3
HIF1A-209ENST00000556827 TMPRSS15P98073 1019 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 ALDH6A1Q02252 535 aaKnown RBP6.91□□□□□ -1.3
HIF1A-209ENST00000556827 EPHA7Q15375 998 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 DDB1Q16531 1140 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 BROXQ5VW32 411 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 RNF207Q6ZRF8 634 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 C11orf74Q86VG3 221 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 PASD1Q8IV76 773 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 EDAQ92838 391 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 TUBGCP5Q96RT8 1024 aa6.91□□□□□ -1.3
HIF1A-209ENST00000556827 ZEB2O60315 1214 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 APOL3O95236 402 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 PRLP01236 227 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 EVA1CP58658 441 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 OCRLQ01968 901 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 TERF2Q15554 542 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 USP39Q53GS9 565 aaKnown RBP6.9□□□□□ -1.3
HIF1A-209ENST00000556827 HDGFL2Q7Z4V5 671 aaPredicted RBP6.9□□□□□ -1.3
HIF1A-209ENST00000556827 ZFPM1Q8IX07 1006 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 CFHR4Q92496 578 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 ZNF496Q96IT1 587 aaPredicted RBP6.9□□□□□ -1.3
HIF1A-209ENST00000556827 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 POFUT1Q9H488 388 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 MSL2Q9HCI7 577 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 VTA1Q9NP79 307 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 MAGEL2Q9UJ55 1249 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
HIF1A-209ENST00000556827 TMEM131LA2VDJ0 1609 aa6.9□□□□□ -1.31
HIF1A-209ENST00000556827 XIRP1Q702N8 1843 aaKnown RBP6.9□□□□□ -1.31
HIF1A-209ENST00000556827 CANXP27824 592 aaKnown RBP6.89□□□□□ -1.31
HIF1A-209ENST00000556827 MSX2P35548 267 aaPredicted RBP6.89□□□□□ -1.31
HIF1A-209ENST00000556827 CDKN1CP49918 316 aaPredicted RBP6.89□□□□□ -1.31
HIF1A-209ENST00000556827 DUSP8Q13202 625 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 MYBPC3Q14896 1274 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 TTC38Q5R3I4 469 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 PRAMEF9Q5VWM5 478 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 CLRN3Q8NCR9 226 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 COG1Q8WTW3 980 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 MAML3Q96JK9 1138 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 FOXB1Q99853 325 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 MYL10Q9BUA6 226 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 PCDH12Q9NPG4 1184 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 MSRAQ9UJ68 235 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 ATP8A1Q9Y2Q0 1164 aa6.89□□□□□ -1.31
HIF1A-209ENST00000556827 HS3ST3A1Q9Y663 406 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms