RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CITO14578 2027 aa19.23■□□□□ 0.67
SHMT2-225ENST00000556798 COL4A4P53420 1690 aaPredicted RBP19.23■□□□□ 0.67
SHMT2-225ENST00000556798 SZT2Q5T011 3432 aa19.23■□□□□ 0.67
SHMT2-225ENST00000556798 MEIS3P2A8K0S8 358 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 H0YCG3 227 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 N4BP3O15049 544 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 DGKIO75912 1065 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 PRR29P0C7W0 189 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 RAB27AP51159 221 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 STRN3Q13033 797 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 ZC2HC1CQ53FD0 456 aaPredicted RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 SLC27A1Q6PCB7 646 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 TARS2Q9BW92 718 aaKnown RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 MRPL4Q9BYD3 311 aaKnown RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 FGFBP2Q9BYJ0 223 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 ELAC1Q9H777 363 aaKnown RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 MRPL44Q9H9J2 332 aaKnown RBP19.22■□□□□ 0.67
SHMT2-225ENST00000556798 RNF19AQ9NV58 838 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 HES2Q9Y543 173 aa19.22■□□□□ 0.67
SHMT2-225ENST00000556798 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 CASP5P51878 434 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 FAM160A1Q05DH4 1040 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 SNW1Q13573 536 aaKnown RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 CLLU1OSQ5K130 101 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 PPP2R2DQ66LE6 453 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 CNNM4Q6P4Q7 775 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 SPRED2Q7Z698 418 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 SMG8Q8ND04 991 aaKnown RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 ENGASEQ8NFI3 743 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 ZNF689Q96CS4 500 aaPredicted RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 APOL6Q9BWW8 343 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 NXF3Q9H4D5 531 aaKnown RBP19.21■□□□□ 0.67
SHMT2-225ENST00000556798 SEL1LQ9UBV2 794 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 TBX20Q9UMR3 447 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 IPPQ9Y573 584 aa19.21■□□□□ 0.67
SHMT2-225ENST00000556798 TBKBP1A7MCY6 615 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 ZNF623O75123 536 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 GCNT3O95395 438 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 MYBP10242 640 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 SKIP12755 728 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 BTG3Q14201 252 aaPredicted RBP19.2■□□□□ 0.66
SHMT2-225ENST00000556798 UNC13DQ70J99 1090 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 ZNF720Q7Z2F6 126 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 GLIS3Q8NEA6 775 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 SP7Q8TDD2 431 aaPredicted RBP19.2■□□□□ 0.66
SHMT2-225ENST00000556798 HELQQ8TDG4 1101 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 BICD1Q96G01 975 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 SLC28A3Q9HAS3 691 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 OLFML3Q9NRN5 406 aa19.2■□□□□ 0.66
SHMT2-225ENST00000556798 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
SHMT2-225ENST00000556798 CHD7Q9P2D1 2997 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 GTPBP6O43824 516 aaPredicted RBP19.19■□□□□ 0.66
SHMT2-225ENST00000556798 NR1I2O75469 434 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 PPP1R37O75864 691 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 EOMESO95936 686 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 GTF2BQ00403 316 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 TAP1Q03518 808 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ZNF568Q3ZCX4 644 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 AGMOQ6ZNB7 445 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 Q7L0L9 218 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ZBTB33Q86T24 672 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 SLC17A8Q8NDX2 589 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 KCNN1Q92952 543 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 PGBD4Q96DM1 585 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ZBTB45Q96K62 511 aaPredicted RBP19.19■□□□□ 0.66
SHMT2-225ENST00000556798 FAM161BQ96MY7 647 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ADPGKQ9BRR6 497 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 IKZF4Q9H2S9 585 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 TTYH1Q9H313 450 aaPredicted RBP19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ST6GALNAC4Q9H4F1 302 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 CERS4Q9HA82 394 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 HCSTQ9UBK5 93 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 TNFSF13BQ9Y275 285 aa19.19■□□□□ 0.66
SHMT2-225ENST00000556798 PDCD11Q14690 1871 aaKnown RBP19.19■□□□□ 0.66
SHMT2-225ENST00000556798 HNRNPDLO14979 420 aaKnown RBP19.18■□□□□ 0.66
SHMT2-225ENST00000556798 KLRC4O43908 158 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
SHMT2-225ENST00000556798 ITGA4P13612 1032 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 UBE2HP62256 183 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 KCNA1Q09470 495 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 FAM26FQ5R3K3 315 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 ZNF697Q5TEC3 545 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 MRPL10Q7Z7H8 261 aaKnown RBP19.18■□□□□ 0.66
SHMT2-225ENST00000556798 MAP4K3Q8IVH8 894 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 CMTR2Q8IYT2 770 aaKnown RBP19.18■□□□□ 0.66
SHMT2-225ENST00000556798 ABI1Q8IZP0 508 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 CASD1Q96PB1 797 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 STRA6Q9BX79 667 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 CDT1Q9H211 546 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 ZNF576Q9H609 170 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 PTPRHQ9HD43 1115 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 MTUS1Q9ULD2 1270 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms