RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 BOLA2Q9H3K6 86 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 TBC1D13Q9NVG8 400 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 PAG1Q9NWQ8 432 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 ERAP1Q9NZ08 941 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 MBD1Q9UIS9 605 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-242ENST00000556644 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 STK24Q9Y6E0 443 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 KDM3AQ9Y4C1 1321 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 MYH7P12883 1935 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 NBPF19A0A087WUL8 3843 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 COL4A2P08572 1712 aa4.89□□□□□ -1.63
ATXN3-242ENST00000556644 GSTTP1A0A1W2PQM5 241 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 FAM149AA5PLN7 773 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 TRABD2BA6NFA1 517 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 RRN3P2A6NIE6 340 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 SLC38A8A6NNN8 435 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 MEIS3P2A8K0S8 358 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 OPLAHO14841 1288 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 SNPHO15079 494 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 DHX16O60231 1041 aaKnown RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 RANBP6O60518 1105 aaKnown RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ECI2O75521 394 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ZMYND10O75800 440 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 RHOBTB1O94844 696 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 VTNP04004 478 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 FGFR4P22455 802 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 GDI1P31150 447 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 CTDSPL2Q05D32 466 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ZNF543Q08ER8 600 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 SEMA3BQ13214 749 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 NEDD9Q14511 834 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 UBE3CQ15386 1083 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 QRICH1Q2TAL8 776 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 TXNDC11Q6PKC3 985 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ARMCX6Q7L4S7 300 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ZNF598Q86UK7 904 aaKnown RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ADAMTS14Q8WXS8 1223 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 TMEM47Q9BQJ4 181 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 GTPBP2Q9BX10 602 aaKnown RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 CHST12Q9NRB3 414 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ZDHHC7Q9NXF8 308 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 IL17BQ9UHF5 180 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 DPP7Q9UHL4 492 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 TNNQ9UQP3 1299 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 EXOC6BQ9Y2D4 811 aa4.88□□□□□ -1.63
ATXN3-242ENST00000556644 PRG3Q9Y2Y8 225 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 ATXN2Q99700 1313 aaKnown RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 MUC22E2RYF6 1773 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-242ENST00000556644 WDR81Q562E7 1941 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 EML5Q05BV3 1969 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 RELNP78509 3460 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SMIM35A0A1B0GVV1 85 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 CAPN8A6NHC0 703 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SPATA31C2B4DYI2 1134 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 F8W810 466 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SOD2P04179 222 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 MYF5P13349 255 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 ZSCAN20P17040 1043 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 CEBPBP17676 345 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 ENGP17813 658 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 POU3F2P20265 443 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 BCKDHBP21953 392 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 FCARP24071 287 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 HOXA6P31267 233 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 DHPSP49366 369 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 GLUD2P49448 558 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 HSD17B4P51659 736 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 CXADRP78310 365 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 MRPS9P82933 396 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 PPARAQ07869 468 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 PON2Q15165 354 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SLC5A9Q2M3M2 681 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 GNPTABQ3T906 1256 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 MTHFD1LQ6UB35 978 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 KIAA0319LQ8IZA0 1049 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 HDDC3Q8N4P3 179 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SPRYD3Q8NCJ5 442 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SSH3Q8TE77 659 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 CLUAP1Q96AJ1 413 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 IPO9Q96P70 1041 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 PCYT2Q99447 389 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 HERC2P3Q9BVR0 1158 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 TRMT61BQ9BVS5 477 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 API5Q9BZZ5 524 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 PLEKHA4Q9H4M7 779 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 VAT1LQ9HCJ6 419 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 ZNF334Q9HCZ1 680 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 DKK4Q9UBT3 224 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 RCAN3Q9UKA8 241 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 SLC8A2Q9UPR5 921 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 MRPL11Q9Y3B7 192 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 MRPS23Q9Y3D9 190 aaKnown RBP4.87□□□□□ -1.63
ATXN3-242ENST00000556644 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 NCANO14594 1321 aa4.87□□□□□ -1.63
ATXN3-242ENST00000556644 LRRK2Q5S007 2527 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 551.4 ms