RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 GPRC5CQ9NQ84 441 aa11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 PRG3Q9Y2Y8 225 aaPredicted RBP11.73□□□□□ -0.53
SPTLC2-205ENST00000556607 ARL5CA6NH57 179 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 B4GALT5O43286 388 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 ARF4P18085 180 aaPredicted RBP11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 AKAP5P24588 427 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 PLA2G5P39877 138 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 CCT6AP40227 531 aaKnown RBP11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 KCNC3Q14003 757 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 C8orf34Q49A92 452 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 CABP7Q86V35 215 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 NOSTRINQ8IVI9 506 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 C12orf76Q8N812 135 aaPredicted RBP11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 MCPH1Q8NEM0 835 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 EDAQ92838 391 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 CCDC51Q96ER9 411 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 GAD1Q99259 594 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 TMEM175Q9BSA9 504 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 S1PR5Q9H228 398 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 MRPL17Q9NRX2 175 aaKnown RBP11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 NR2E1Q9Y466 385 aa11.72□□□□□ -0.53
SPTLC2-205ENST00000556607 ST18O60284 1047 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 B4GALT3O60512 393 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 EPCAMP16422 314 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 RPA1P27694 616 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 SCNN1GP51170 649 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 ITIH3Q06033 890 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 NBR1Q14596 966 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 PPFIBP1Q86W92 1011 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 DEPTORQ8TB45 409 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 SUSD6Q92537 303 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 RIPOR3Q96MK2 946 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 ZFP42Q96MM3 310 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 RPS6KC1Q96S38 1066 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 POLR3CQ9BUI4 534 aaPredicted RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 RAB34Q9BZG1 259 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 ADAM7Q9H2U9 754 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 NXF3Q9H4D5 531 aaKnown RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 PRMT7Q9NVM4 692 aaPredicted RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 MIOSQ9NXC5 875 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 KLK14Q9P0G3 267 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 CDH22Q9UJ99 828 aa11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 DBR1Q9UK59 544 aaKnown RBP11.71□□□□□ -0.53
SPTLC2-205ENST00000556607 URODP06132 367 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 MTHFRP42898 656 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 ZXDAP98168 799 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 AMHR2Q16671 573 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 HFE2Q6ZVN8 426 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 COLGALT2Q8IYK4 626 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 PBXIP1Q96AQ6 731 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 IFT74Q96LB3 600 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 NECTIN4Q96NY8 510 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 KIF2CQ99661 725 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 ADPGKQ9BRR6 497 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 C2orf40Q9H1Z8 148 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 POMKQ9H5K3 350 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 POLD4Q9HCU8 107 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 SSX2IPQ9Y2D8 614 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 GIT1Q9Y2X7 761 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 KIF3AQ9Y496 699 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
SPTLC2-205ENST00000556607 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 TMEM221A6NGB7 291 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 M0R296 226 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 N4BP3O15049 544 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 SOD2P04179 222 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 PRKCBP05771 671 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 MYBP10242 640 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 TRAPPC10P48553 1259 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 PTGDRQ13258 359 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 PRPF4BQ13523 1007 aaKnown RBP11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
SPTLC2-205ENST00000556607 RABEP1Q15276 862 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms