RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 JADE3Q92613 823 aa6.2□□□□□ -1.42
SCFD1-221ENST00000556534 HOXB13Q92826 284 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-221ENST00000556534 SLC2A13Q96QE2 648 aa6.2□□□□□ -1.42
SCFD1-221ENST00000556534 TCF25Q9BQ70 676 aa6.2□□□□□ -1.42
SCFD1-221ENST00000556534 GREM2Q9H772 168 aa6.2□□□□□ -1.42
SCFD1-221ENST00000556534 DDX56Q9NY93 547 aaKnown RBP6.2□□□□□ -1.42
SCFD1-221ENST00000556534 NCDNQ9UBB6 729 aa6.2□□□□□ -1.42
SCFD1-221ENST00000556534 STC2O76061 302 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 GYPEP15421 78 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 ZNF20P17024 532 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 CASRP41180 1078 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 MCAMP43121 646 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 EXOSC10Q01780 885 aaKnown RBP6.19□□□□□ -1.42
SCFD1-221ENST00000556534 DUSP2Q05923 314 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 CDSNQ15517 529 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 CLUL1Q15846 466 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 MUM1L1Q5H9M0 696 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 FAM111BQ6SJ93 734 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 MAMDC4Q6UXC1 1216 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 ZNF808Q8N4W9 903 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-221ENST00000556534 C1QTNF3Q9BXJ4 246 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 SLC13A1Q9BZW2 595 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 TUBD1Q9UJT1 453 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 SH3BP1Q9Y3L3 701 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 RPTORQ8N122 1335 aa6.19□□□□□ -1.42
SCFD1-221ENST00000556534 PRRG2O14669 202 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 ITGA10O75578 1167 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 PDGFRBP09619 1106 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 ACO1P21399 889 aaKnown RBP6.18□□□□□ -1.42
SCFD1-221ENST00000556534 C5AR1P21730 350 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 NPEPPSP55786 919 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 PTPN21Q16825 1174 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 FAM214AQ32MH5 1076 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 ZNF585AQ6P3V2 769 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 PRRT2Q7Z6L0 340 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-221ENST00000556534 D2HGDHQ8N465 521 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 CHST13Q8NET6 341 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 GPR156Q8NFN8 814 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 TEKT5Q96M29 485 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 MPHOSPH9Q99550 1183 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 KLC2Q9H0B6 622 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 RBM12Q9NTZ6 932 aaKnown RBP6.18□□□□□ -1.42
SCFD1-221ENST00000556534 GPRC5DQ9NZD1 345 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 TCAF1Q9Y4C2 921 aa6.18□□□□□ -1.42
SCFD1-221ENST00000556534 ADCY6O43306 1168 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
SCFD1-221ENST00000556534 PHF2O75151 1096 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 MGAT2Q10469 447 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 ACAP2Q15057 778 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 FKBP15Q5T1M5 1219 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 Q6ZVL8 140 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 EDAQ92838 391 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 DVL3Q92997 716 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-221ENST00000556534 ARL8AQ96BM9 186 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 IL17RAQ96F46 866 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 ZNF512Q96ME7 567 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-221ENST00000556534 HECAQ9UBI9 543 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-221ENST00000556534 SPEF1Q9Y4P9 236 aa6.17□□□□□ -1.42
SCFD1-221ENST00000556534 KLHL33A6NCF5 533 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 AKR1B10O60218 316 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 NDUFS2O75306 463 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 CRHR1P34998 444 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-221ENST00000556534 GZMKP49863 264 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 MRPL49Q13405 166 aaKnown RBP6.16□□□□□ -1.42
SCFD1-221ENST00000556534 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-221ENST00000556534 TRMT2AQ8IZ69 625 aaKnown RBP6.16□□□□□ -1.42
SCFD1-221ENST00000556534 OR5M3Q8NGP4 307 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 OR2I1PQ8NGU4 316 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 BORCS6Q96GS4 357 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 ADOQ96SZ5 270 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 ADI1Q9BV57 179 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 DEF6Q9H4E7 631 aa6.16□□□□□ -1.42
SCFD1-221ENST00000556534 CAPN14A8MX76 684 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 MUSKO15146 869 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCFD1-221ENST00000556534 GASTP01350 101 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ECHS1P30084 290 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ADSLP30566 484 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-221ENST00000556534 NEK2P51955 445 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ODF1Q14990 250 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 SEPT2Q15019 361 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ELAVL1Q15717 326 aaKnown RBP6.15□□□□□ -1.42
SCFD1-221ENST00000556534 PRAMEF14Q5SWL7 426 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 GJC2Q5T442 439 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-221ENST00000556534 MFSD5Q6N075 450 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 PNMA8AQ86V59 439 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-221ENST00000556534 PALM2Q8IXS6 379 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 OR7D4Q8NG98 312 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 CHMP4CQ96CF2 233 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 FAM89AQ96GI7 184 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 BCO1Q9HAY6 547 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 ZBTB21Q9ULJ3 1066 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 TSC22D4Q9Y3Q8 395 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 MRFAP1Q9Y605 127 aa6.15□□□□□ -1.42
SCFD1-221ENST00000556534 WNT10BO00744 389 aa6.14□□□□□ -1.43
SCFD1-221ENST00000556534 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-221ENST00000556534 SREBF1P36956 1147 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms