RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 RESP18Q5W5W9 173 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 AGMOQ6ZNB7 445 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 HACE1Q8IYU2 909 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 IQUBQ8NA54 791 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 TMEM161BQ8NDZ6 487 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
PSEN1-217ENST00000556533 DDX12PQ92771 950 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 NTPCRQ9BSD7 190 aaKnown RBP18.8■□□□□ 0.6
PSEN1-217ENST00000556533 SCAND2PQ9GZW5 306 aaPredicted RBP18.8■□□□□ 0.6
PSEN1-217ENST00000556533 NXF3Q9H4D5 531 aaKnown RBP18.8■□□□□ 0.6
PSEN1-217ENST00000556533 TMEM134Q9H6X4 195 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 RSAD1Q9HA92 442 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 GDPD2Q9HCC8 539 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 AAASQ9NRG9 546 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 ARHGAP28Q9P2N2 729 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 PARP2Q9UGN5 583 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 PCDHB12Q9Y5F1 795 aa18.8■□□□□ 0.6
PSEN1-217ENST00000556533 PHLPP2Q6ZVD8 1323 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 H3BNC9 293 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 LPXNO60711 386 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 RB1P06400 928 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 LINC00271P0C7V0 271 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 AKAP5P24588 427 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 RNASELQ05823 741 aaKnown RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 NOMO2Q5JPE7 1267 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 EEF1DP3Q658K8 133 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 TAS1R3Q7RTX0 852 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 LRRC43Q8N309 656 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 ADPGKQ9BRR6 497 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 TCHPQ9BT92 498 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 C11orf84Q9BUA3 381 aaPredicted RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 TARS2Q9BW92 718 aaKnown RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 GBP3Q9H0R5 595 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 CWH43Q9H720 699 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 ALG13Q9NP73 1137 aaKnown RBP18.79■□□□□ 0.6
PSEN1-217ENST00000556533 MTCH2Q9Y6C9 303 aa18.79■□□□□ 0.6
PSEN1-217ENST00000556533 K7ENM7 598 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 TRAK2O60296 914 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 POMCP01189 267 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 MAPTP10636 758 aaKnown RBP18.78■□□□□ 0.6
PSEN1-217ENST00000556533 IDEP14735 1019 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 PBX3P40426 434 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 AFF1P51825 1210 aaKnown RBP18.78■□□□□ 0.6
PSEN1-217ENST00000556533 ZNF131P52739 623 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 HAUS6Q7Z4H7 955 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 KLHL23Q8NBE8 558 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 BICD1Q96G01 975 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 ACO2Q99798 780 aaKnown RBP18.78■□□□□ 0.6
PSEN1-217ENST00000556533 PLVAPQ9BX97 442 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 MRPL9Q9BYD2 267 aaKnown RBP18.78■□□□□ 0.6
PSEN1-217ENST00000556533 UBN1Q9NPG3 1134 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 KLK14Q9P0G3 267 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 KCNH3Q9ULD8 1083 aa18.78■□□□□ 0.6
PSEN1-217ENST00000556533 CHD7Q9P2D1 2997 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 A0A1B0GVL5 298 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 ARL5CA6NH57 179 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 C5orf67F2Z3F1 127 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 H0YCG3 227 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 GRM6O15303 877 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 LAG3P18627 525 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 NMT1P30419 496 aaKnown RBP18.77■□□□□ 0.6
PSEN1-217ENST00000556533 E2F4Q16254 413 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 PTPROQ16827 1216 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 SFR1Q86XK3 245 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 THNSL1Q8IYQ7 743 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 COLGALT1Q8NBJ5 622 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 ZNF558Q96NG5 402 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 FAM193BQ96PV7 902 aaPredicted RBP18.77■□□□□ 0.6
PSEN1-217ENST00000556533 GAD1Q99259 594 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 LRRC27Q9C0I9 530 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 CUEDC2Q9H467 287 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 TBC1D13Q9NVG8 400 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 SNTG2Q9NY99 539 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 TBC1D7Q9P0N9 293 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 GDAQ9Y2T3 454 aa18.77■□□□□ 0.6
PSEN1-217ENST00000556533 ZC3H11AO75152 810 aaKnown RBP eCLIP18.76■□□□□ 0.59
PSEN1-217ENST00000556533 HARSP12081 509 aaKnown RBP18.76■□□□□ 0.59
PSEN1-217ENST00000556533 CMA1P23946 247 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 MLH1P40692 756 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
PSEN1-217ENST00000556533 NCKAP1LP55160 1127 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 HERC4Q5GLZ8 1057 aaPredicted RBP18.76■□□□□ 0.59
PSEN1-217ENST00000556533 ADALQ6DHV7 355 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 APBB1IPQ7Z5R6 666 aaPredicted RBP18.76■□□□□ 0.59
PSEN1-217ENST00000556533 DNAJC19Q96DA6 116 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 ZFP42Q96MM3 310 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 TNFSF13BQ9Y275 285 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 COL4A6Q14031 1691 aa18.76■□□□□ 0.59
PSEN1-217ENST00000556533 ITGB1P05556 798 aa18.75■□□□□ 0.59
PSEN1-217ENST00000556533 PFKFB1P16118 471 aa18.75■□□□□ 0.59
PSEN1-217ENST00000556533 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
PSEN1-217ENST00000556533 AMPD3Q01432 767 aa18.75■□□□□ 0.59
PSEN1-217ENST00000556533 SKIV2LQ15477 1246 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms