RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ITGA4P13612 1032 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 IL9P15248 144 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PDCP20941 246 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 MARCKSP29966 332 aaPredicted RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 AXLP30530 894 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 MLH1P40692 756 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 NAMPTP43490 491 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 NPTX2P47972 431 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 NRIP1P48552 1158 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SCNN1GP51170 649 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SLC12A3P55017 1021 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PEX3P56589 373 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 UBE3AQ05086 875 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 RAD51AP2Q09MP3 1159 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 ADAM15Q13444 863 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 KARSQ15046 597 aaKnown RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PCBP1Q15365 356 aaKnown RBP eCLIP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 FAM187BQ17R55 369 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SPECC1Q5M775 1068 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 NT5DC1Q5TFE4 455 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 USP49Q70CQ1 688 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 ZBTB8OSQ8IWT0 167 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SYT2Q8N9I0 419 aaPredicted RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 GSTCDQ8NEC7 633 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 DEPTORQ8TB45 409 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 AUTS2Q8WXX7 1259 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 SYMPKQ92797 1274 aaKnown RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 KIFAP3Q92845 792 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CCDC51Q96ER9 411 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CLIC6Q96NY7 704 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 TCF25Q9BQ70 676 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 MRPL9Q9BYD2 267 aaKnown RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 C2orf40Q9H1Z8 148 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 TLR9Q9NR96 1032 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 BLOC1S4Q9NUP1 217 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 PRMT7Q9NVM4 692 aaPredicted RBP8.96□□□□□ -0.98
VTI1B-206ENST00000556461 KLK14Q9P0G3 267 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CLEC1BQ9P126 229 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CACNG4Q9UBN1 327 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 LZTS1Q9Y250 596 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 CNTNAP2Q9UHC6 1331 aa8.96□□□□□ -0.98
VTI1B-206ENST00000556461 GRXCR2A6NFK2 248 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 CCDC169A6NNP5 214 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 ACKR2O00590 384 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 INPPL1O15357 1258 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 STX6O43752 255 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 PPM1AP35813 382 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 CEBPZQ03701 1054 aaKnown RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 RNASELQ05823 741 aaKnown RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 PRPF4BQ13523 1007 aaKnown RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 MAPK6Q16659 721 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 DUSP6Q16828 381 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 CSPP1Q1MSJ5 1256 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 AAK1Q2M2I8 961 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 SLC27A1Q6PCB7 646 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 EFHBQ8N7U6 833 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 CNNM3Q8NE01 707 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 URGCPQ8TCY9 931 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 IGSF21Q96ID5 467 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 EPSTI1Q96J88 318 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 IFT74Q96LB3 600 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 USP28Q96RU2 1077 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 TLE6Q9H808 572 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 MARCH5Q9NX47 278 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 SNTG2Q9NY99 539 aa8.95□□□□□ -0.98
VTI1B-206ENST00000556461 FBXO2Q9UK22 296 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 BARX2Q9UMQ3 279 aaPredicted RBP8.95□□□□□ -0.98
VTI1B-206ENST00000556461 NRP1O14786 923 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 SLC16A4O15374 487 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PLCG1P19174 1290 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 IGFBP6P24592 240 aaPredicted RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 GUCY2CP25092 1073 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 LONP1P36776 959 aaKnown RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 UBA7P41226 1012 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 ALDH7A1P49419 539 aaKnown RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 KRT17Q04695 432 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 NCBP1Q09161 790 aaKnown RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PKP1Q13835 747 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 KCNC3Q14003 757 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 DHX8Q14562 1220 aaKnown RBP8.94□□□□□ -0.98
VTI1B-206ENST00000556461 MCM6Q14566 821 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 PPP2R5AQ15172 486 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 TAS1R1Q7RTX1 841 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 HSCBQ8IWL3 235 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 COLGALT2Q8IYK4 626 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 VPS52Q8N1B4 723 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 RABGGTAQ92696 567 aa8.94□□□□□ -0.98
VTI1B-206ENST00000556461 KHSRPQ92945 711 aaKnown RBP eCLIP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms