RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RARS2Q5T160 578 aaKnown RBP25.09■■□□□ 1.61
ACTN1-220ENST00000556433 GAD1Q99259 594 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 NFKBIZQ9BYH8 718 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 TUFT1Q9NNX1 390 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 TSHZ2Q9NRE2 1034 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 DZANK1Q9NVP4 752 aa25.09■■□□□ 1.61
ACTN1-220ENST00000556433 MUC6Q6W4X9 2439 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 ARL5CA6NH57 179 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 WEE2P0C1S8 567 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 ARF4P18085 180 aaPredicted RBP25.08■■□□□ 1.61
ACTN1-220ENST00000556433 MTHFRP42898 656 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 KANK3Q6NY19 840 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 BMP8AQ7Z5Y6 402 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 PPFIBP1Q86W92 1011 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 PBXIP1Q96AQ6 731 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 ZSCAN31Q96LW9 406 aaPredicted RBP25.08■■□□□ 1.61
ACTN1-220ENST00000556433 RIPOR3Q96MK2 946 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 NACC1Q96RE7 527 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 APOL6Q9BWW8 343 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 EMILIN2Q9BXX0 1053 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 TRIM6Q9C030 488 aaPredicted RBP25.08■■□□□ 1.61
ACTN1-220ENST00000556433 FOXP1Q9H334 677 aaPredicted RBP25.08■■□□□ 1.61
ACTN1-220ENST00000556433 POMKQ9H5K3 350 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 GPRC5CQ9NQ84 441 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 MIOSQ9NXC5 875 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 NR2E1Q9Y466 385 aa25.08■■□□□ 1.61
ACTN1-220ENST00000556433 B4GALT5O43286 388 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 MED24O75448 989 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 HOXD11P31277 338 aaPredicted RBP25.07■■□□□ 1.6
ACTN1-220ENST00000556433 MLH1P40692 756 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 OR1G1P47890 313 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 ATAT1Q5SQI0 421 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 COLGALT2Q8IYK4 626 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 HACE1Q8IYU2 909 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 KLHL5Q96PQ7 755 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 POLR3CQ9BUI4 534 aaPredicted RBP25.07■■□□□ 1.6
ACTN1-220ENST00000556433 DBR1Q9UK59 544 aaKnown RBP25.07■■□□□ 1.6
ACTN1-220ENST00000556433 PRG3Q9Y2Y8 225 aaPredicted RBP25.07■■□□□ 1.6
ACTN1-220ENST00000556433 ARID2Q68CP9 1835 aa25.07■■□□□ 1.6
ACTN1-220ENST00000556433 INPPL1O15357 1258 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 KLRC2P26717 231 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 PTPN21Q16825 1174 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 ZBTB33Q86T24 672 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 CABP7Q86V35 215 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 FAM184AQ8NB25 1140 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 FBXO18Q8NFZ0 1043 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 ERMNQ8TAM6 284 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 ZFP42Q96MM3 310 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 KCNH6Q9H252 994 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 MRPL17Q9NRX2 175 aaKnown RBP25.06■■□□□ 1.6
ACTN1-220ENST00000556433 GIT1Q9Y2X7 761 aa25.06■■□□□ 1.6
ACTN1-220ENST00000556433 LRRIQ4A6NIV6 560 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 LILRB3O75022 631 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 CNPP09543 421 aaKnown RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 OR52Z1P0C646 297 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 RBM25P49756 843 aaKnown RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 SCNN1GP51170 649 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 HMGN5P82970 282 aaKnown RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 SIGLEC14Q08ET2 396 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 ORC2Q13416 577 aaPredicted RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 GNL2Q13823 731 aaKnown RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 CDR2LQ86X02 465 aaPredicted RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 MCPH1Q8NEM0 835 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 FBXL18Q96ME1 805 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 NXF3Q9H4D5 531 aaKnown RBP25.05■■□□□ 1.6
ACTN1-220ENST00000556433 MARCH5Q9NX47 278 aa25.05■■□□□ 1.6
ACTN1-220ENST00000556433 A0A1B0GUA9 196 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 NPTXRO95502 500 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 SOD2P04179 222 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 AKAP5P24588 427 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 DSC1Q08554 894 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 TTC38Q5R3I4 469 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 SLC27A1Q6PCB7 646 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 POTEGQ6S5H5 508 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 TAS1R1Q7RTX1 841 aa25.04■■□□□ 1.6
ACTN1-220ENST00000556433 SH2B1Q9NRF2 756 aaPredicted RBP25.04■■□□□ 1.6
ACTN1-220ENST00000556433 SPDYE4A6NLX3 237 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 C2CD4DB7Z1M9 353 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 C2CD2LO14523 706 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 NR1I2O75469 434 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 RPA1P27694 616 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 KIAA1841Q6NSI8 718 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 TMC5Q6UXY8 1006 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 COLEC11Q9BWP8 271 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 PRMT7Q9NVM4 692 aaPredicted RBP25.03■■□□□ 1.6
ACTN1-220ENST00000556433 PARP2Q9UGN5 583 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 SSX2IPQ9Y2D8 614 aa25.03■■□□□ 1.6
ACTN1-220ENST00000556433 URODP06132 367 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 CLCN4P51793 760 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 PADI6Q6TGC4 694 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 NOSTRINQ8IVI9 506 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 ZBTB8OSQ8IWT0 167 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 SUGP1Q8IWZ8 645 aaKnown RBP25.02■■□□□ 1.6
ACTN1-220ENST00000556433 KIF2CQ99661 725 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 HERC2P3Q9BVR0 1158 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 KLK14Q9P0G3 267 aa25.02■■□□□ 1.6
ACTN1-220ENST00000556433 ARHGEF35A5YM69 484 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 CYP11B2P19099 503 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 PPP4R3CPQ6ZMV5 832 aa25.01■■□□□ 1.59
ACTN1-220ENST00000556433 KREMEN2Q8NCW0 462 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms