RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 USP28Q96RU2 1077 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 FZD8Q9H461 694 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 ALG13Q9NP73 1137 aaKnown RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
SLIRP-205ENST00000556310 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-205ENST00000556310 ZMYM2Q9UBW7 1377 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SSBP05455 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 PRKCBP05771 671 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 PLCG1P19174 1290 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 EFNA5P52803 228 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 UBE3AQ05086 875 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SLC27A1Q6PCB7 646 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SMG8Q8ND04 991 aaKnown RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 PLIN2Q99541 437 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 RSAD1Q9HA92 442 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 C17orf75Q9HAS0 396 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 COG5Q9UP83 839 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 IPPQ9Y573 584 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 SRPRBQ9Y5M8 271 aaKnown RBP12.73□□□□□ -0.37
SLIRP-205ENST00000556310 TTC28Q96AY4 2481 aa12.73□□□□□ -0.37
SLIRP-205ENST00000556310 VCANP13611 3396 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 CARNS1A5YM72 827 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 ACKR2O00590 384 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 N4BP3O15049 544 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 INPPL1O15357 1258 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 OFD1O75665 1012 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 FGF18O76093 207 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 ZSCAN22P10073 491 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 MLLT3P42568 568 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 NPTX2P47972 431 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 PEX3P56589 373 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 CAMK1Q14012 370 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 SLC39A14Q15043 492 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 LRRC15Q8TF66 581 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 POF1BQ8WVV4 589 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
SLIRP-205ENST00000556310 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
SLIRP-205ENST00000556310 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 NPTXRO95502 500 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 F13A1P00488 732 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 EDN1P05305 212 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 ITGA4P13612 1032 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 DNAJB1P25685 340 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 TXLNAP40222 546 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 PBX3P40426 434 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 PLCB3Q01970 1234 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 RNASELQ05823 741 aaKnown RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 RAD54LQ92698 747 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 HLA-CQ95604 372 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
SLIRP-205ENST00000556310 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 TLR9Q9NR96 1032 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms