RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 LMBR1Q8WVP7 490 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 TP53INP1Q96A56 240 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 RTP3Q9BQQ7 232 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 FTHL17Q9BXU8 183 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 SMG9Q9H0W8 520 aaKnown RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 ADAM7Q9H2U9 754 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 CPVLQ9H3G5 476 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 POMKQ9H5K3 350 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 AGO3Q9H9G7 860 aaKnown RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 ZBTB40Q9NUA8 1239 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
ATXN3-236ENST00000556220 NRCAMQ92823 1304 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 PKD1L2Q7Z442 2459 aa7.94□□□□□ -1.14
ATXN3-236ENST00000556220 SCO2A0A1W2PP80 73 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 FGF18O76093 207 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 PSAPP07602 524 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ARP10275 920 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CD52P31358 61 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 HSD17B4P51659 736 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 GHRHRQ02643 423 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ITIH3Q06033 890 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 NEDD9Q14511 834 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 PGM5Q15124 567 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ALX1Q15699 326 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 QRICH1Q2TAL8 776 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 RRP12Q5JTH9 1297 aaKnown RBP7.93□□□□□ -1.14
ATXN3-236ENST00000556220 SPOUT1Q5T280 376 aaKnown RBP7.93□□□□□ -1.14
ATXN3-236ENST00000556220 TSHZ3Q63HK5 1081 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CES5AQ6NT32 575 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 LLGL2Q6P1M3 1020 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 METTL7BQ6UX53 244 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ADGRF4Q8IZF3 695 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ZDHHC14Q8IZN3 488 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CYP2W1Q8TAV3 490 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 COL26A1Q96A83 441 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 GPATCH3Q96I76 525 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 PRIMPOLQ96LW4 560 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 GPR20Q99678 358 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 TOMM22Q9NS69 142 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 TMEM260Q9NX78 707 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 MAP3K20Q9NYL2 800 aaKnown RBP7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CDH22Q9UJ99 828 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 ZNF215Q9UL58 517 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-236ENST00000556220 LZTS1Q9Y250 596 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 USP20Q9Y2K6 914 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 KCNMB2Q9Y691 235 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CDY2AQ9Y6F7 541 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 CCDC171Q6TFL3 1326 aa7.93□□□□□ -1.14
ATXN3-236ENST00000556220 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
ATXN3-236ENST00000556220 HIDE1A8MVS5 230 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 SCG2P13521 617 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 BRD2P25440 801 aaKnown RBP7.92□□□□□ -1.14
ATXN3-236ENST00000556220 CCND2P30279 289 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 SOX18P35713 384 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 GATMP50440 423 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 OCLNQ16625 522 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 ST3GAL2Q16842 350 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 ARTNQ5T4W7 220 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 UTP14CQ5TAP6 766 aaKnown RBP7.92□□□□□ -1.14
ATXN3-236ENST00000556220 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 CYFIP1Q7L576 1253 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 THNSL1Q8IYQ7 743 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 SAMD3Q8N6K7 520 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 TDRD5Q8NAT2 981 aaKnown RBP7.92□□□□□ -1.14
ATXN3-236ENST00000556220 IL31RAQ8NI17 732 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 DNAJB3Q8WWF6 145 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 WFDC12Q8WWY7 111 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 RUBCNQ92622 972 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 CASP10Q92851 521 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 VAT1LQ9HCJ6 419 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 ZFP64Q9NPA5 681 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 NGRNQ9NPE2 291 aaKnown RBP7.92□□□□□ -1.14
ATXN3-236ENST00000556220 PUF60Q9UHX1 559 aaKnown RBP7.92□□□□□ -1.14
ATXN3-236ENST00000556220 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 SQORQ9Y6N5 450 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 R4GN57 208 aa7.92□□□□□ -1.14
ATXN3-236ENST00000556220 MBLAC1A4D2B0 266 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MMP20O60882 483 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 FGAP02671 866 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 SDHBP21912 280 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MTHFRP42898 656 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 SARSP49591 514 aaKnown RBP7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MRPS6P82932 125 aaKnown RBP7.91□□□□□ -1.14
ATXN3-236ENST00000556220 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 PPFIA1Q13136 1202 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 C16orf46Q6P387 395 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 DGKHQ86XP1 1220 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 DCLK2Q8N568 766 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 COLGALT1Q8NBJ5 622 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 MRPS27Q92552 414 aaKnown RBP7.91□□□□□ -1.14
ATXN3-236ENST00000556220 PLD4Q96BZ4 506 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 TCF25Q9BQ70 676 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 AMNQ9BXJ7 453 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 JMJD4Q9H9V9 463 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 TYW1Q9NV66 732 aaKnown RBP7.91□□□□□ -1.14
ATXN3-236ENST00000556220 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
ATXN3-236ENST00000556220 PADI3Q9ULW8 664 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms