RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 ALCAMQ13740 583 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 SKOR2Q2VWA4 1001 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-210ENST00000556166 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 ATF7IP2Q5U623 682 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 MYOCDQ8IZQ8 938 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 ADSSL1Q8N142 457 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 CRIPAKQ8N1N5 446 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 APBB2Q92870 758 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
GABRB3-210ENST00000556166 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 KCTD10Q9H3F6 313 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 RGS18Q9NS28 235 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 STYXL1Q9Y6J8 313 aa12.58□□□□□ -0.4
GABRB3-210ENST00000556166 LTBP2Q14767 1821 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 AXLP30530 894 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 IKBKEQ14164 716 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
GABRB3-210ENST00000556166 COBLL1Q53SF7 1204 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 SMG8Q8ND04 991 aaKnown RBP12.57□□□□□ -0.4
GABRB3-210ENST00000556166 ZSWIM2Q8NEG5 633 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 MED15Q96RN5 788 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
GABRB3-210ENST00000556166 A0A0B4J269 797 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 A0A0U1RQF3 1178 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ABHD14A-ACY1A0A1B0GW23 586 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TOM1L1O75674 476 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 NPTXRO95502 500 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 DEFB103AP81534 67 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 SHHQ15465 462 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ZBTB41Q5SVQ8 909 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 NOTUMQ6P988 496 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 GUF1Q8N442 669 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TRIML1Q8N9V2 468 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 BICD1Q96G01 975 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 CDT1Q9H211 546 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TMEM206Q9H813 350 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 HES2Q9Y543 173 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 PCDHB2Q9Y5E7 798 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TANC1Q9C0D5 1861 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 N4BP3O15049 544 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 MEFVO15553 781 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 FAM189A1O60320 539 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ABCD1P33897 745 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 LIG4P49917 911 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 NLRP12P59046 1061 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 MCL1Q07820 350 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 NCBP1Q09161 790 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 DPCR1Q3MIW9 517 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 SEZ6Q53EL9 994 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 STXBP4Q6ZWJ1 553 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 SLC24A5Q71RS6 500 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 MRPL10Q7Z7H8 261 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
GABRB3-210ENST00000556166 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 CCDC51Q96ER9 411 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 CBWD1Q9BRT8 395 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 AGPAT3Q9NRZ7 376 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 FAM105AQ9NUU6 356 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 RNF19AQ9NV58 838 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
GABRB3-210ENST00000556166 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
GABRB3-210ENST00000556166 UBE4BO95155 1302 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 MYH11P35749 1972 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 CLIC2O15247 247 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 ZNF623O75123 536 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 ANKRD40Q6AI12 368 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-210ENST00000556166 CEP120Q8N960 986 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 LPPQ93052 612 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
GABRB3-210ENST00000556166 PRO3102Q9H379 93 aa12.55□□□□□ -0.4
GABRB3-210ENST00000556166 NXF3Q9H4D5 531 aaKnown RBP12.55□□□□□ -0.4
GABRB3-210ENST00000556166 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms