RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CAPSQ13938 189 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 LRRC41Q15345 812 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 ISM2Q6H9L7 571 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 NFRKBQ6P4R8 1299 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 LRRC55Q6ZSA7 311 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 RNF180Q86T96 592 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 RPAINQ86UA6 219 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 SLC9A9Q8IVB4 645 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 PSPC1Q8WXF1 523 aaKnown RBP8.56□□□□□ -1.04
PCNX4-210ENST00000555740 IFT74Q96LB3 600 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 TYW1Q9NV66 732 aaKnown RBP8.56□□□□□ -1.04
PCNX4-210ENST00000555740 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
PCNX4-210ENST00000555740 NMT1P30419 496 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 SMTNP53814 917 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 KNOP1Q1ED39 458 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 LUZP1Q86V48 1076 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 ZNF333Q96JL9 665 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 CEP63Q96MT8 703 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 ACCSQ96QU6 501 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 C2orf40Q9H1Z8 148 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TMEM206Q9H813 350 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 SEPT3Q9UH03 358 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 PDCD11Q14690 1871 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 ANK1P16157 1881 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 DNM1LO00429 736 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 SLC16A3O15427 465 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 HRO43593 1189 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 GCNT3O95395 438 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 PGK1P00558 417 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 HSPA1AP0DMV8 641 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 HSPA1BP0DMV9 641 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 GNAT1P11488 350 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 CNGA1P29973 690 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 EFNA5P52803 228 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 PMS1P54277 932 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 MARSP56192 900 aaKnown RBP8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TPM4P67936 248 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 ENPEPQ07075 957 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TFDP1Q14186 410 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 FAM187BQ17R55 369 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TAS1R3Q7RTX0 852 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 HAUS6Q7Z4H7 955 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 ZNF410Q86VK4 478 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TRAPPC12Q8WVT3 735 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 SPSB2Q99619 263 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 TSG101Q99816 390 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 UNC93B1Q9H1C4 597 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 KMT5AQ9NQR1 393 aa8.55□□□□□ -1.04
PCNX4-210ENST00000555740 C17orf102A2RUQ5 167 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 CALUO43852 315 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 CAND2O75155 1236 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 ASGR1P07306 291 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 ZNF16P17020 682 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 KLRC1P26715 233 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 ACLYP53396 1101 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 PEX3P56589 373 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 SPAG1Q07617 926 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 LAMTOR4Q0VGL1 99 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 DRP2Q13474 957 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 PCBP1Q15365 356 aaKnown RBP eCLIP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 KCNA10Q16322 511 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 OCLNQ16625 522 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 SLC9C1Q4G0N8 1177 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 TAF2Q6P1X5 1199 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 ARRDC4Q8NCT1 418 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 CLP1Q92989 425 aaKnown RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 TMEM143Q96AN5 459 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 DMAC2Q9NW81 257 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 SUCLA2Q9P2R7 463 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 TBX20Q9UMR3 447 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 EXOC7Q9UPT5 735 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 NFE2L3Q9Y4A8 694 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 STYXL1Q9Y6J8 313 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 BECN2A8MW95 431 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 MAPK13O15264 365 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 TGFB1I1O43294 461 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 CCL5P13501 91 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 EEF1GP26641 437 aaKnown RBP8.54□□□□□ -1.04
PCNX4-210ENST00000555740 TMOD1P28289 359 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 DNM2P50570 870 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 SOX10P56693 466 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 RBL2Q08999 1139 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 ANKRD40Q6AI12 368 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 EFCAB12Q6NXP0 572 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 FAM114A1Q8IWE2 563 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 RNF214Q8ND24 703 aa8.54□□□□□ -1.04
PCNX4-210ENST00000555740 GIPC2Q8TF65 315 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms