RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 APOBEC3AP31941 199 aaPredicted RBP5.48□□□□□ -1.53
SNX6-204ENST00000555541 TAP1Q03518 808 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 CFAP100Q494V2 611 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 UBE2R2Q712K3 238 aaPredicted RBP5.48□□□□□ -1.53
SNX6-204ENST00000555541 FAM83AQ86UY5 434 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 SYT12Q8IV01 421 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 LYSMD2Q8IV50 215 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 NXPE1Q8N323 547 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 SERHL2Q9H4I8 314 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 A0A1W2PR48 441 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 MAFGO15525 162 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 RECQL4O94761 1208 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 PABPC4Q13310 644 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNX6-204ENST00000555541 KIF18BQ86Y91 864 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 SLC41A1Q8IVJ1 513 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 ARHGEF19Q8IW93 802 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
SNX6-204ENST00000555541 OR5M3Q8NGP4 307 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 TEX101Q9BY14 249 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 WDR11Q9BZH6 1224 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 OSBPL2Q9H1P3 480 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
SNX6-204ENST00000555541 EPN1Q9Y6I3 576 aaPredicted RBP5.47□□□□□ -1.53
SNX6-204ENST00000555541 COL3A1P02461 1466 aaPredicted RBP5.46□□□□□ -1.53
SNX6-204ENST00000555541 LCHNA4D1U4 455 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 ZNF891A8MT65 544 aaPredicted RBP5.46□□□□□ -1.54
SNX6-204ENST00000555541 NRP1O14786 923 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 POU3F2P20265 443 aaPredicted RBP5.46□□□□□ -1.54
SNX6-204ENST00000555541 WNT3AP56704 352 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 METRNLQ641Q3 311 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 IQSEC1Q6DN90 963 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 RD3Q7Z3Z2 195 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 XYLT1Q86Y38 959 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 EFHBQ8N7U6 833 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 CHTF18Q8WVB6 975 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 TMEM260Q9NX78 707 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 ANKFY1Q9P2R3 1169 aa5.46□□□□□ -1.54
SNX6-204ENST00000555541 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 GYPEP15421 78 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 ZSCAN20P17040 1043 aaPredicted RBP5.45□□□□□ -1.54
SNX6-204ENST00000555541 CD40P25942 277 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 FLT3P36888 993 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 GZMKP49863 264 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 BEAN1Q3B7T3 259 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 GDF7Q7Z4P5 450 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 CDYL2Q8N8U2 506 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 LINC00476Q8WZB0 136 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 AKIP1Q9NQ31 210 aa5.45□□□□□ -1.54
SNX6-204ENST00000555541 INTS7Q9NVH2 962 aaKnown RBP5.45□□□□□ -1.54
SNX6-204ENST00000555541 EIF2B4Q9UI10 523 aaKnown RBP5.45□□□□□ -1.54
SNX6-204ENST00000555541 PRSS38A1L453 326 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 NCR1O76036 304 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 FOXI1Q12951 378 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 ZNF362Q5T0B9 420 aaPredicted RBP5.44□□□□□ -1.54
SNX6-204ENST00000555541 GPR158Q5T848 1215 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 ANKS6Q68DC2 871 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 FBXO42Q6P3S6 717 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 CCDC62Q6P9F0 684 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 SH3TC2Q8TF17 1288 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 DCLRE1CQ96SD1 692 aaKnown RBP5.44□□□□□ -1.54
SNX6-204ENST00000555541 MS4A5Q9H3V2 200 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 PRDM12Q9H4Q4 367 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 TRPM5Q9NZQ8 1165 aa5.44□□□□□ -1.54
SNX6-204ENST00000555541 USP36Q9P275 1121 aaKnown RBP5.44□□□□□ -1.54
SNX6-204ENST00000555541 MAGEC2Q9UBF1 373 aaPredicted RBP5.44□□□□□ -1.54
SNX6-204ENST00000555541 ZMYM3Q14202 1370 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 ASMTLO95671 621 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 BMPR1AP36894 532 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 GPR15P49685 360 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 UBE3CQ15386 1083 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 SF3A1Q15459 793 aaKnown RBP5.43□□□□□ -1.54
SNX6-204ENST00000555541 PRR16Q569H4 304 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 EPHA10Q5JZY3 1008 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 DRICH1Q6PGQ1 229 aaPredicted RBP5.43□□□□□ -1.54
SNX6-204ENST00000555541 ESPNLQ6ZVH7 1005 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 GAB3Q8WWW8 586 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 ANKS1AQ92625 1134 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 DNAJC2Q99543 621 aaKnown RBP5.43□□□□□ -1.54
SNX6-204ENST00000555541 ADAM2Q99965 735 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 IFT57Q9NWB7 429 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 USP18Q9UMW8 372 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 FRMD4BQ9Y2L6 1034 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
SNX6-204ENST00000555541 GAGE12BA1L429 117 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 GAGE12HA6NDE8 117 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 RNASET2O00584 256 aaKnown RBP5.42□□□□□ -1.54
SNX6-204ENST00000555541 PHC1P78364 1004 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 CCDC178Q5BJE1 867 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 MICALCLQ6ZW33 695 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 KRTAP1-5Q9BYS1 174 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 CYP4F11Q9HBI6 524 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 THG1LQ9NWX6 298 aaKnown RBP5.42□□□□□ -1.54
SNX6-204ENST00000555541 EVLQ9UI08 416 aaPredicted RBP5.42□□□□□ -1.54
SNX6-204ENST00000555541 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
SNX6-204ENST00000555541 PIPSLA2A3N6 862 aa5.41□□□□□ -1.54
SNX6-204ENST00000555541 MARCH11A6NNE9 402 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms