RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 FZD8Q9H461 694 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
SRP54-206ENST00000555317 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 IPPQ9Y573 584 aa13.33□□□□□ -0.28
SRP54-206ENST00000555317 UNC80Q8N2C7 3258 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 REV3LO60673 3130 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 A0A1B0GUA9 196 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 SLC16A4O15374 487 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 CUTAO60888 179 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 ZC3H11AO75152 810 aaKnown RBP eCLIP13.32□□□□□ -0.28
SRP54-206ENST00000555317 DDIT3P35638 169 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 ALDH7A1P49419 539 aaKnown RBP13.32□□□□□ -0.28
SRP54-206ENST00000555317 DCAF4L1Q3SXM0 396 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 UBXN11Q5T124 520 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 SV2BQ7L1I2 683 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 MRPL10Q7Z7H8 261 aaKnown RBP13.32□□□□□ -0.28
SRP54-206ENST00000555317 REEP2Q9BRK0 252 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 CCDC113Q9H0I3 377 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 GBP3Q9H0R5 595 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
SRP54-206ENST00000555317 BLOC1S4Q9NUP1 217 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
SRP54-206ENST00000555317 NPHP3-ACAD11A0A0J9YXS1 232 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 SFI1A8K8P3 1242 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 GRM6O15303 877 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 BRD1O95696 1058 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 ITGB1P05556 798 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 KRT85P78386 507 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 KRT17Q04695 432 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 MAPK7Q13164 816 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 KCNT2Q6UVM3 1135 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 CDR2LQ86X02 465 aaPredicted RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 DAW1Q8N136 415 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 PDILTQ8N807 584 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 SMG8Q8ND04 991 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 BICD1Q96G01 975 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 MRPL4Q9BYD3 311 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 PANK2Q9BZ23 570 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 PDZD7Q9H5P4 517 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 TMEM134Q9H6X4 195 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 CWH43Q9H720 699 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 PARVGQ9HBI0 331 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 PARP2Q9UGN5 583 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 PUF60Q9UHX1 559 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 HES2Q9Y543 173 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
SRP54-206ENST00000555317 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
SRP54-206ENST00000555317 MEIS3P2A8K0S8 358 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 K7ENM7 598 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 NR1I2O75469 434 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 OFD1O75665 1012 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 FGF18O76093 207 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 SCP2P22307 547 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 ABCD1P33897 745 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 MLH1P40692 756 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRP54-206ENST00000555317 UBE3AQ05086 875 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
SRP54-206ENST00000555317 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 AGMOQ6ZNB7 445 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 LRRC55Q6ZSA7 311 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
SRP54-206ENST00000555317 MICAL1Q8TDZ2 1067 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 POF1BQ8WVV4 589 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 TCHPQ9BT92 498 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
SRP54-206ENST00000555317 FAM13BQ9NYF5 915 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 SPG21Q9NZD8 308 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 ARHGAP28Q9P2N2 729 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 THEGQ9P2T0 379 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
SRP54-206ENST00000555317 PLXNA4Q9HCM2 1894 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 ARL5CA6NH57 179 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 POMCP01189 267 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 AKAP5P24588 427 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 PBX3P40426 434 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 BCAR1P56945 870 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 LRRC15Q8TF66 581 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 TMEM169Q96HH4 297 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 GAD1Q99259 594 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 LRRC27Q9C0I9 530 aa13.29□□□□□ -0.28
SRP54-206ENST00000555317 ENTPD7Q9NQZ7 604 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms