RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
HNRNPC-219ENST00000555309 LRWD1Q9UFC0 647 aa11.12□□□□□ -0.63
HNRNPC-219ENST00000555309 KCNH3Q9ULD8 1083 aa11.12□□□□□ -0.63
HNRNPC-219ENST00000555309 E9PMD0 336 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 TSPAN1O60635 241 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 DGAT1O75907 488 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 FGF18O76093 207 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 TPM3P06753 285 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 RPA1P27694 616 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 CCT6AP40227 531 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.634e-14■■■■□ 21.2
HNRNPC-219ENST00000555309 PTENP60484 403 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 ATP2C1P98194 919 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 CLUL1Q15846 466 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 AMHR2Q16671 573 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 PTPROQ16827 1216 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 AGMOQ6ZNB7 445 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 KRBA2Q6ZNG9 492 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 LUZP1Q86V48 1076 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 TMEM173Q86WV6 379 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 TCP11Q8WWU5 503 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 AGPAT5Q9NUQ2 364 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 FAM105AQ9NUU6 356 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 COG5Q9UP83 839 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 ZKSCAN5Q9Y2L8 839 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 HES2Q9Y543 173 aa11.11□□□□□ -0.63
HNRNPC-219ENST00000555309 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PER2O15055 1255 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 OFD1O75665 1012 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 EDN1P05305 212 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 NLRP12P59046 1061 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 CDC42EP1Q00587 391 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 MBTD1Q05BQ5 628 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 C11orf57Q6ZUT1 292 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 SMG8Q8ND04 991 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 BCL7CQ8WUZ0 217 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 P2RX5Q93086 422 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 NACC1Q96RE7 527 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PLIN2Q99541 437 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PYM1Q9BRP8 204 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 INO80BQ9C086 356 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 CD320Q9NPF0 282 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 RWDD3Q9Y3V2 267 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PPME1Q9Y570 386 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
HNRNPC-219ENST00000555309 AP5Z1O43299 807 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 EOMESO95936 686 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 IL9P15248 144 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 CDC25BP30305 580 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 GRIN1Q05586 938 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ABI1Q8IZP0 508 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 UBE2Q2Q8WVN8 375 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 CLIC6Q96NY7 704 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 UHRF1Q96T88 793 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 KIFC3Q9BVG8 833 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 BHMT2Q9H2M3 363 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 DNAJB4Q9UDY4 337 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 PCDHB12Q9Y5F1 795 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ASAP2O43150 1006 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ZNF500O60304 480 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 DDHD2O94830 711 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 NRIP1P48552 1158 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 MXD4Q14582 209 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 TRIML1Q8N9V2 468 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 LRRC15Q8TF66 581 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.632e-7■■■□□ 17.4
HNRNPC-219ENST00000555309 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 PNMA5Q96PV4 448 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 GBP3Q9H0R5 595 aa11.09□□□□□ -0.63
HNRNPC-219ENST00000555309 CXCL16Q9H2A7 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms