RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 MCM5P33992 734 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 DSG1Q02413 1049 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-215ENST00000555259 TARBP2Q15633 366 aaKnown RBP10.86□□□□□ -0.67
SCFD1-215ENST00000555259 UGCGQ16739 394 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 CATSPER4Q7RTX7 472 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 MICU3Q86XE3 530 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 FAM126AQ9BYI3 521 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-215ENST00000555259 INO80BQ9C086 356 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-215ENST00000555259 GLT8D2Q9H1C3 349 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 CDH7Q9ULB5 785 aa10.86□□□□□ -0.67
SCFD1-215ENST00000555259 CNTNAP2Q9UHC6 1331 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 TARSP26639 723 aaKnown RBP10.85□□□□□ -0.67
SCFD1-215ENST00000555259 PFKPQ01813 784 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 DMWDQ09019 674 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 JAKMIP3Q5VZ66 844 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 LILRA6Q6PI73 481 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 MTSS1LQ765P7 747 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 MRPL10Q7Z7H8 261 aaKnown RBP10.85□□□□□ -0.67
SCFD1-215ENST00000555259 ZNF410Q86VK4 478 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 COLGALT2Q8IYK4 626 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 RUFY2Q8WXA3 655 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 CHST7Q9NS84 486 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 AGPAT5Q9NUQ2 364 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 BARHL2Q9NY43 387 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 ANGPTL2Q9UKU9 493 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 WDR81Q562E7 1941 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 MTCL1Q9Y4B5 1905 aaKnown RBP10.85□□□□□ -0.67
SCFD1-215ENST00000555259 DOCK6Q96HP0 2047 aa10.85□□□□□ -0.67
SCFD1-215ENST00000555259 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 IGKV6-21A0A0C4DH24 114 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 F8W810 466 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 hCG_1984214I3L0E3 225 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 ZMYND10O75800 440 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 RPS9P46781 194 aaKnown RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 OR1G1P47890 313 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 DNM2P50570 870 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 LPAL2Q16609 132 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 PRR16Q569H4 304 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 LAIR1Q6GTX8 287 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 GRASPQ7Z6J2 395 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 RHPN2Q8IUC4 686 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 GLYCTKQ8IVS8 523 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 ZNF713Q8N859 430 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 FGF13Q92913 245 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 MAP4K1Q92918 833 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 B3GALT6Q96L58 329 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 NLRP4Q96MN2 994 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 CEP89Q96ST8 783 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 NELL2Q99435 816 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 RAB23Q9ULC3 237 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 V9GY48 417 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 ANKRD11Q6UB99 2663 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-215ENST00000555259 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
SCFD1-215ENST00000555259 NCAM2O15394 837 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 LRP3O75074 770 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 CHMLP26374 656 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 NTHL1P78549 312 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 FUT2Q10981 343 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 MTAPQ13126 283 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 MTERF2Q49AM1 385 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 TPRG1Q6ZUI0 275 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 LENG9Q96B70 501 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 MBOAT7Q96N66 472 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 SH2D3AQ9BRG2 576 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 NIFKQ9BYG3 293 aaKnown RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 RWDD1Q9H446 243 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 FAM217BQ9NTX9 383 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 FNIP2Q9P278 1114 aa10.83□□□□□ -0.68
SCFD1-215ENST00000555259 SUCLA2Q9P2R7 463 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 RBM8AQ9Y5S9 174 aaKnown RBP10.83□□□□□ -0.68
SCFD1-215ENST00000555259 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 ADAMTS3O15072 1205 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 CHMP2AO43633 222 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 RETP07949 1114 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 TDGF1P13385 188 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 RPL17P18621 184 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 PMLP29590 882 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 DSC1Q08554 894 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 FZD5Q13467 585 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 UBXN11Q5T124 520 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 SGMS1Q86VZ5 419 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 GPR65Q8IYL9 337 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 CELF5Q8N6W0 485 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 KXD1Q9BQD3 176 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 PHF20Q9BVI0 1012 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 SEMA4GQ9NTN9 838 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 RBM28Q9NW13 759 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 PKD1L2Q7Z442 2459 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 SGSM2O43147 1006 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 GDF9O60383 454 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 STBD1O95210 358 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 IGHDP01880 384 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms