RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-207ENST00000555114 GLUD2P49448 558 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 UBXN11Q5T124 520 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
NEDD1-207ENST00000555114 RPS6KC1Q96S38 1066 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 RTP3Q9BQQ7 232 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 TRIM6Q9C030 488 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-207ENST00000555114 MINDY3Q9H8M7 445 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 MAN1C1Q9NR34 630 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-207ENST00000555114 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
NEDD1-207ENST00000555114 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 B4GALT3O60512 393 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 LILRB3O75022 631 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 RFX1P22670 979 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 ZNF579Q8NAF0 562 aaKnown RBP17.25■□□□□ 0.35
NEDD1-207ENST00000555114 WASF1Q92558 559 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 NKD2Q969F2 451 aaPredicted RBP17.25■□□□□ 0.35
NEDD1-207ENST00000555114 RHOBTB2Q9BYZ6 727 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 KCNK12Q9HB15 430 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 IPPQ9Y573 584 aa17.25■□□□□ 0.35
NEDD1-207ENST00000555114 CCDC195A0A1B0GUA6 201 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 PRR23AA6NEV1 266 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 INO80B-WBP1J3KQ70 363 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 AOC1P19801 751 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 GBP2P32456 591 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 AFF1P51825 1210 aaKnown RBP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 SMG8Q8ND04 991 aaKnown RBP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 HDAC7Q8WUI4 952 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 HAS1Q92839 578 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 DYDC2Q96IM9 177 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 COLEC11Q9BWP8 271 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 MARCH5Q9NX47 278 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-207ENST00000555114 GIT1Q9Y2X7 761 aa17.24■□□□□ 0.35
NEDD1-207ENST00000555114 DENND4AQ7Z401 1863 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 INPPL1O15357 1258 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 TEX28O15482 410 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 TSPAN1O60635 241 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 C1RP00736 705 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 MLH1P40692 756 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 PTENP60484 403 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 FOXK2Q01167 660 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CYP4A11Q02928 519 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CREMQ03060 361 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 POU5F1BQ06416 359 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CWF19L1Q69YN2 538 aaKnown RBP17.23■□□□□ 0.35
NEDD1-207ENST00000555114 ASCL5Q7RTU5 278 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 SIX5Q8N196 739 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 NXPE3Q969Y0 559 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 GAD1Q99259 594 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CSRNP2Q9H175 543 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 PLEKHA4Q9H4M7 779 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 PIDD1Q9HB75 910 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 RXFP1Q9HBX9 757 aa17.23■□□□□ 0.35
NEDD1-207ENST00000555114 WDR6Q9NNW5 1121 aaKnown RBP17.23■□□□□ 0.35
NEDD1-207ENST00000555114 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-207ENST00000555114 CLUHO75153 1309 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 STK25O00506 426 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 DGAT1O75907 488 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 SCNN1GP51170 649 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 DSG1Q02413 1049 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 DSC1Q08554 894 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 SCRN1Q12765 414 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
NEDD1-207ENST00000555114 CCDC105Q8IYK2 499 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
NEDD1-207ENST00000555114 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 EIF2AQ9BY44 585 aaKnown RBP17.22■□□□□ 0.35
NEDD1-207ENST00000555114 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
NEDD1-207ENST00000555114 KRT2P35908 639 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 KIAA0319Q5VV43 1072 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 FRMD5Q7Z6J6 570 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 RNF168Q8IYW5 571 aaPredicted RBP17.21■□□□□ 0.35
NEDD1-207ENST00000555114 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 ZDHHC7Q9NXF8 308 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 EPS15L1Q9UBC2 864 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.35
NEDD1-207ENST00000555114 PLXNA3P51805 1871 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 PTPRZ1P23471 2315 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-207ENST00000555114 ZMYM2Q9UBW7 1377 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 SLITRK3O94933 977 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 LYPLA2O95372 231 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 NPR3P17342 541 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 GRIK3Q13003 919 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
NEDD1-207ENST00000555114 FUT10Q6P4F1 479 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms