RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CD69Q07108 199 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 TKFCQ3LXA3 575 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 RHOUQ7L0Q8 258 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 ZNF496Q96IT1 587 aaPredicted RBP7.19□□□□□ -1.26
VRK1-203ENST00000555067 WNT8AQ9H1J5 351 aa7.19□□□□□ -1.26
VRK1-203ENST00000555067 MRPL42Q9Y6G3 142 aaKnown RBP7.19□□□□□ -1.26
VRK1-203ENST00000555067 TRIM24O15164 1050 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 HOXA3O43365 443 aaPredicted RBP7.18□□□□□ -1.26
VRK1-203ENST00000555067 RECQL4O94761 1208 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 LSSP48449 732 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 NRG3P56975 720 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 KRTAP10-11P60412 298 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 MBNL2Q5VZF2 373 aaKnown RBP7.18□□□□□ -1.26
VRK1-203ENST00000555067 GLB1L3Q8NCI6 653 aaPredicted RBP7.18□□□□□ -1.26
VRK1-203ENST00000555067 OR5M3Q8NGP4 307 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 GAB3Q8WWW8 586 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 FEZ1Q99689 392 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 EPC1Q9H2F5 836 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 FZD1Q9UP38 647 aa7.18□□□□□ -1.26
VRK1-203ENST00000555067 CDC45O75419 566 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 RHOBTB3O94955 611 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 HK1P19367 917 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 HSD3B2P26439 372 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 MRPS21P82921 87 aaKnown RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 PCBP1Q15365 356 aaKnown RBP eCLIP7.17□□□□□ -1.26
VRK1-203ENST00000555067 FAM214AQ32MH5 1076 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 LMBR1LQ6UX01 489 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 TAS1R1Q7RTX1 841 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 FAM83AQ86UY5 434 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 GLB1L2Q8IW92 636 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 OR2W6PQ8NHA6 318 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 RSAD2Q8WXG1 361 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 IL17RAQ96F46 866 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 GPR101Q96P66 508 aaPredicted RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 CPPED1Q9BRF8 314 aaPredicted RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 FDXACB1Q9BRP7 624 aaPredicted RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 TARS2Q9BW92 718 aaKnown RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
VRK1-203ENST00000555067 USP18Q9UMW8 372 aa7.17□□□□□ -1.26
VRK1-203ENST00000555067 NUDT3O95989 172 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 ITGB1P05556 798 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 GYPEP15421 78 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 IBSPP21815 317 aaPredicted RBP7.16□□□□□ -1.26
VRK1-203ENST00000555067 DUSP2Q05923 314 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 MRPL49Q13405 166 aaKnown RBP7.16□□□□□ -1.26
VRK1-203ENST00000555067 TERF2Q15554 542 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 SEPT7Q16181 437 aaKnown RBP7.16□□□□□ -1.26
VRK1-203ENST00000555067 LRRC55Q6ZSA7 311 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 DOK3Q7L591 496 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 C11orf74Q86VG3 221 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 CXorf67Q86X51 503 aaPredicted RBP7.16□□□□□ -1.26
VRK1-203ENST00000555067 MFSD3Q96ES6 412 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 KLHL42Q9P2K6 505 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 SORCS3Q9UPU3 1222 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 NUMBLQ9Y6R0 609 aa7.16□□□□□ -1.26
VRK1-203ENST00000555067 DNAJC6O75061 913 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 CASRP41180 1078 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 GZMKP49863 264 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 IL2P60568 153 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 LY6G5CQ5SRR4 150 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 IQSEC1Q6DN90 963 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 FRMD7Q6ZUT3 714 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 OR52N2Q8NGI0 321 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
VRK1-203ENST00000555067 SPTLC3Q9NUV7 552 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 NOP58Q9Y2X3 529 aaKnown RBP7.15□□□□□ -1.26
VRK1-203ENST00000555067 PPP2R3BQ9Y5P8 575 aa7.15□□□□□ -1.26
VRK1-203ENST00000555067 A0A1W2PR48 441 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 PRSS38A1L453 326 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 CLSTN1O94985 981 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 ABHD16AO95870 558 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 MANFP55145 182 aaKnown RBP7.14□□□□□ -1.27
VRK1-203ENST00000555067 ANAPC15P60006 121 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 PPARAQ07869 468 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 MGAT5Q09328 741 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 CPT1CQ8TCG5 803 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 PTGFRNQ9P2B2 879 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 KCNG1Q9UIX4 513 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 PACSIN3Q9UKS6 424 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 CLCA2Q9UQC9 943 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 HDAC5Q9UQL6 1122 aa7.14□□□□□ -1.27
VRK1-203ENST00000555067 SCAF4O95104 1147 aaKnown RBP7.13□□□□□ -1.27
VRK1-203ENST00000555067 FKBP9O95302 570 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 CFBP00751 764 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 NR4A1P22736 598 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 ADCYAP1R1P41586 468 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 C21orf58P58505 322 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 MEF2AQ02078 507 aaPredicted RBP7.13□□□□□ -1.27
VRK1-203ENST00000555067 PTPAQ15257 358 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 VPS72Q15906 364 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 PLEKHG4Q58EX7 1191 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 COLEC12Q5KU26 742 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 KCNV1Q6PIU1 500 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 FKBP9P1Q75LS8 142 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 MSL3Q8N5Y2 521 aaKnown RBP7.13□□□□□ -1.27
VRK1-203ENST00000555067 PROKR1Q8TCW9 393 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 CPEB1Q9BZB8 566 aaKnown RBP7.13□□□□□ -1.27
VRK1-203ENST00000555067 BRINP2Q9C0B6 783 aa7.13□□□□□ -1.27
VRK1-203ENST00000555067 KCNH6Q9H252 994 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms