RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TIMM10P62072 90 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 ATP8B2P98198 1209 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 TNFAIP1Q13829 316 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 MVPQ14764 893 aaKnown RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 TARBP2Q15633 366 aaKnown RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 SLC10A6Q3KNW5 377 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 TTLL10Q6ZVT0 673 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 FAM83AQ86UY5 434 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 PPIL6Q8IXY8 311 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 ZDHHC14Q8IZN3 488 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 NETO2Q8NC67 525 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 FEZF2Q8TBJ5 459 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 ZNF384Q8TF68 577 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 DIO2Q92813 273 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 PEX11GQ96HA9 241 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 WNK4Q96J92 1243 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 CHAMP1Q96JM3 812 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 CLMNQ96JQ2 1002 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 MMP19Q99542 508 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 TMEM39BQ9GZU3 492 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 FBXL7Q9UJT9 491 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 NOP58Q9Y2X3 529 aaKnown RBP5.09□□□□□ -1.59
VTI1B-203ENST00000554636 FPGT-TNNI3KV9GXZ4 949 aa5.09□□□□□ -1.59
VTI1B-203ENST00000554636 MYO5AQ9Y4I1 1855 aaKnown RBP5.09□□□□□ -1.6
VTI1B-203ENST00000554636 LCP1P13796 627 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 HOXC12P31275 282 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 BCL6P41182 706 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 TM4SF4P48230 202 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 G3BP1Q13283 466 aaKnown RBP eCLIP5.08□□□□□ -1.6
VTI1B-203ENST00000554636 DDR2Q16832 855 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 SUPT20HL1Q3ZLR7 823 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 FKBP1CQ5VVH2 108 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 CDC42EP5Q6NZY7 148 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 LILRA6Q6PI73 481 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 ZGPATQ8N5A5 531 aaKnown RBP5.08□□□□□ -1.6
VTI1B-203ENST00000554636 TMEM145Q8NBT3 493 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.08□□□□□ -1.6
VTI1B-203ENST00000554636 SMARCC2Q8TAQ2 1214 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 PLEKHO2Q8TD55 490 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 KCNC2Q96PR1 638 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 GPR108Q9NPR9 543 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 HMG20BQ9P0W2 317 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 RCAN3Q9UKA8 241 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 PCDHA2Q9Y5H9 948 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 PMF1-BGLAPU3KQ54 211 aa5.08□□□□□ -1.6
VTI1B-203ENST00000554636 AK9Q5TCS8 1911 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 CDK5RAP2Q96SN8 1893 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 SIPA1L1O43166 1804 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 MROH7-TTC4A0A0A0MT08 1334 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 MANSC4A6NHS7 340 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 AGRPO00253 132 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 ARNTLO00327 626 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 SURF6O75683 361 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 ZBTB48P10074 688 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 MCAMP43121 646 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 BTDP43251 543 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 GFRA1P56159 465 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 RHBDL3P58872 404 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 RPL11P62913 178 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 PPP2R2AP63151 447 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 SREBF2Q12772 1141 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 VGLL4Q14135 290 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 CEP68Q76N32 757 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DZIP1Q86YF9 867 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DCP2Q8IU60 420 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 ANKRD13AQ8IZ07 590 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 FAM151AQ8WW52 585 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 TSPAN17Q96FV3 270 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 TRMT2BQ96GJ1 504 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 ABHD8Q96I13 439 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 NEUROD6Q96NK8 337 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 SYT3Q9BQG1 590 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 RNF38Q9H0F5 515 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 AP5M1Q9H0R1 490 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DDX4Q9NQI0 724 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 TMOD2Q9NZR1 351 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 ABCF2Q9UG63 623 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DBNLQ9UJU6 430 aaKnown RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DDX19BQ9UMR2 479 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 TIMM13Q9Y5L4 95 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 DOCK1Q14185 1865 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 COL2A1P02458 1487 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-203ENST00000554636 FOCADQ5VW36 1801 aa5.07□□□□□ -1.6
VTI1B-203ENST00000554636 HTTP42858 3142 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 PTPRFP10586 1907 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 GPR75-ASB3A0A0A6YYF3 556 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 A0A0G2JLL6 359 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 A0A1W2PQU0 124 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 OTOL1A6NHN0 477 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 CCDC85CA6NKD9 419 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 FFAR3O14843 346 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 WDHD1O75717 1129 aaPredicted RBP5.06□□□□□ -1.6
VTI1B-203ENST00000554636 UQCRFS1P1P0C7P4 283 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 RGS3P49796 1198 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 MECOMQ03112 1051 aa5.06□□□□□ -1.6
VTI1B-203ENST00000554636 TCP10Q12799 353 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms