RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CLIC4Q9Y696 253 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 K7ERI5 159 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 N4BP3O15049 544 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 POMCP01189 267 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 KRT18P05783 430 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 PLA2G4BP0C869 781 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 MLH1P40692 756 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 NRIP1P48552 1158 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 EFNA5P52803 228 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 ERVFC1P60507 584 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 GRIN1Q05586 938 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 HYAL1Q12794 435 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 CAMK1Q14012 370 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 KARSQ15046 597 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 HYIQ5T013 277 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 ADGRD2Q7Z7M1 963 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 MRPS27Q92552 414 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 PABPC5Q96DU9 382 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 GAD1Q99259 594 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 TCF25Q9BQ70 676 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 FZD8Q9H461 694 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 ZSCAN16Q9H4T2 348 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 NRDE2Q9H7Z3 1164 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 TLE6Q9H808 572 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 UBN1Q9NPG3 1134 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 KMT5AQ9NQR1 393 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 KANSL3Q9P2N6 904 aa11.76□□□□□ -0.53
SHMT2-213ENST00000554600 MTCL1Q9Y4B5 1905 aaKnown RBP11.76□□□□□ -0.53
SHMT2-213ENST00000554600 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-213ENST00000554600 A0A1B0GUA9 196 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 ACKR2O00590 384 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 NCK2O43639 380 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 PLCG1P19174 1290 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 AKAP5P24588 427 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 NDUFV1P49821 464 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-213ENST00000554600 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
SHMT2-213ENST00000554600 STK38Q15208 465 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 CLUL1Q15846 466 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 FAM187BQ17R55 369 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM119Q4V9L6 283 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 SPECC1Q5M775 1068 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 SYT2Q8N9I0 419 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 FAM122AQ96E09 287 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 RPS6KC1Q96S38 1066 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-213ENST00000554600 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 KLK14Q9P0G3 267 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 DNAJB4Q9UDY4 337 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
SHMT2-213ENST00000554600 NPHP3-ACAD11A0A0J9YXS1 232 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ARL5CA6NH57 179 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 TNFRSF10AO00220 468 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PER2O15055 1255 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 SLC16A4O15374 487 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 LINC01565O15544 149 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 SLC26A4O43511 780 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 DDHD2O94830 711 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 GALTP07902 379 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 BMP1P13497 986 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 TXLNAP40222 546 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 OR1G1P47890 313 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 NPTX2P47972 431 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 SLC11A1P49279 550 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 SCNN1GP51170 649 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 AFF1P51825 1210 aaKnown RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 SMTNP53814 917 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PTPAQ15257 358 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 FOXD4L6Q3SYB3 417 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 EEF1DP3Q658K8 133 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 FOXD4L3Q6VB84 417 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 APBB1IPQ7Z5R6 666 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 DAW1Q8N136 415 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ZFP42Q96MM3 310 aa11.74□□□□□ -0.53
SHMT2-213ENST00000554600 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-213ENST00000554600 NECAB3Q96P71 396 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms