RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 OR6J1Q8NGC5 347 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TRAPPC12Q8WVT3 735 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CITED4Q96RK1 184 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TLK1Q9UKI8 766 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SPEF1Q9Y4P9 236 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L15C9J2P7 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L13C9JLJ4 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L11C9JVI0 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L18D6R9N7 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L22D6RA61 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L17D6RBQ6 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L19D6RCP7 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L20D6RJB6 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 F13A1P00488 732 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 FYNP06241 537 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L24Q0WX57 530 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 USP17L6PQ6QN14 398 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 HAUS8Q9BT25 410 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NRBP1Q9UHY1 535 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 WASF2Q9Y6W5 498 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CACNA1EQ15878 2313 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PDE8AO60658 829 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 RASA1P20936 1047 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 KLHL30Q0D2K2 578 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 AP3B2Q13367 1082 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 PLCL1Q15111 1095 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CALCRLQ16602 461 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 WNK4Q96J92 1243 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 NDRG2Q9UN36 371 aaKnown RBP3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CHMP2BQ9UQN3 213 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 MYH8P13535 1937 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ATP6V1C1P21283 382 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 TTC6Q86TZ1 520 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ANKMY2Q8IV38 441 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 CHST12Q9NRB3 414 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 SLC25A13Q9UJS0 675 aa3.51□□□□□ -1.85
SYNE2-212ENST00000554584 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 E5RI56 91 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FCER2P06734 321 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PYGLP06737 847 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ERCC2P18074 760 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 OR1G1P47890 313 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 NUGGCQ68CJ6 796 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ZBTB18Q99592 522 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SLC8A2Q9UPR5 921 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KLRF2D3W0D1 207 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TEX33O43247 280 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PDHA1P08559 390 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 WEE2P0C1S8 567 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CLK2P49760 499 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SUSD4Q5VX71 490 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PALB2Q86YC2 1186 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 C7orf61Q8IZ16 206 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 UBA3Q8TBC4 463 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PYM1Q9BRP8 204 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MKNK1Q9BUB5 465 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 AP1M1Q9BXS5 423 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM49P0CI25 452 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM49CP0CI26 452 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ADD1P35611 737 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MARSP56192 900 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 AP1B1Q10567 949 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 HORMAD1Q86X24 394 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 EFCAB13Q8IY85 973 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MLPHQ9BV36 600 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PAIP1Q9H074 479 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RNF123Q5XPI4 1314 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PEX1O43933 1283 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 VAV1P15498 845 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MLH1P40692 756 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ST8SIA6P61647 398 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ESRRGP62508 458 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SLC7A5Q01650 507 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PDCLQ13371 301 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FAM160B1Q5W0V3 765 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TRAF7Q6Q0C0 670 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 JPH3Q8WXH2 748 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM161AQ9NX61 479 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 MAP3K19Q56UN5 1328 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 F5P12259 2224 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ALDH9A1P49189 494 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 BEX3Q00994 111 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SLFN5Q08AF3 891 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CNGA4Q8IV77 575 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 STKLD1Q8NE28 680 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ULK4Q96C45 1275 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 LRRC27Q9C0I9 530 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 A8MXQ7 604 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 EPHX2P34913 555 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ARID3BQ8IVW6 561 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SELENONQ9NZV5 590 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 EYA2O00167 538 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 KRIT1O00522 736 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ZBED1O96006 694 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 FGAP02671 866 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 GFAPP14136 432 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SERPINB3P29508 390 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 NRG3P56975 720 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms