RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CCT8L2Q96SF2 557 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 RAB17Q9H0T7 212 aa16.91■□□□□ 0.3
ARHGEF40-203ENST00000554514 DLATP10515 647 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 POU5F1Q01860 360 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 JAMLQ86YT9 394 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.9■□□□□ 0.39e-10■■■■■ 79.8
ARHGEF40-203ENST00000554514 DHX38Q92620 1227 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 TCRBV7S2A1N4TA0A589 114 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 SPOPO43791 374 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 CLSTN1O94985 981 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 UBL4BQ8N7F7 174 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 KREMEN1Q96MU8 473 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 GMLQ99445 158 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 CNOT8Q9UFF9 292 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 A0A087WUV0 522 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 KIAA0754O94854 1291 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 ERLIN2O94905 339 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 SHBGP04278 402 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 VCAM1P19320 739 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 SNRNP35Q16560 246 aaKnown RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 MYCBPAPQ8TBZ2 947 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 NAP1L3Q99457 506 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 ERP44Q9BS26 406 aa16.9■□□□□ 0.3
ARHGEF40-203ENST00000554514 COL2A1P02458 1487 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 CHRNB2P17787 502 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 UBAP2Q5T6F2 1119 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 FBXO25Q8TCJ0 367 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 RMDN3Q96TC7 470 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 KCNJ1P48048 391 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 FMNL3Q8IVF7 1028 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 EIF1ADQ8N9N8 165 aaKnown RBP16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 UBIAD1Q9Y5Z9 338 aa16.89■□□□□ 0.29
ARHGEF40-203ENST00000554514 A6NNZ2 444 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 WNT10BO00744 389 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 CCNE2O96020 404 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 PYGMP11217 842 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 KRT5P13647 590 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ADSSP30520 456 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 RASA3Q14644 834 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 PGM5Q15124 567 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 TUBB8Q3ZCM7 444 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 B4GALNT4Q76KP1 1039 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 MCF2L2Q86YR7 1114 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ARFGAP2Q8N6H7 521 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZSWIM1Q9BR11 485 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 RPTORQ8N122 1335 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 BHMG1C9JSJ3 638 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 RTN2O75298 545 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 RFX1P22670 979 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ARHGEF16Q5VV41 709 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 LMBRD2Q68DH5 695 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 TTC27Q6P3X3 843 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZDHHC14Q8IZN3 488 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZNF564Q8TBZ8 553 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 COL4A5P29400 1685 aa16.88■□□□□ 0.29
ARHGEF40-203ENST00000554514 CAND2O75155 1236 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 PPP2R2AP63151 447 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 GTF2BQ00403 316 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 IFT88Q13099 833 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 C2CD6Q53TS8 623 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 FBXW10Q5XX13 1052 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 DUPD1Q68J44 220 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 CCDC105Q8IYK2 499 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 PRELID2Q8N945 189 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 TAS1R2Q8TE23 839 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 WNK4Q96J92 1243 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 SYNGAP1Q96PV0 1343 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 PLA2G6O60733 806 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 CNGA1P29973 690 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 NPTX2P47972 431 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 MTMR2Q13614 643 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
ARHGEF40-203ENST00000554514 EGFRP00533 1210 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 FMO1Q01740 532 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms