RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 VPS53Q5VIR6 699 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 MFSD5Q6N075 450 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 POMZP3Q6PJE2 187 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 MTHFD1LQ6UB35 978 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 MFSD6Q6ZSS7 791 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 HS2ST1Q7LGA3 356 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 SIX5Q8N196 739 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 LRRC43Q8N309 656 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 NSUN6Q8TEA1 469 aaKnown RBP2.99□□□□□ -1.93
PRPF39-206ENST00000554429 TGFBRAP1Q8WUH2 860 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 SPIRE2Q8WWL2 714 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.99□□□□□ -1.93
PRPF39-206ENST00000554429 GPRASP2Q96D09 838 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 BICD1Q96G01 975 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 LRGUKQ96M69 825 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 MOGAT1Q96PD6 335 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 MMTAG2Q9BU76 263 aaKnown RBP2.99□□□□□ -1.93
PRPF39-206ENST00000554429 SARGQ9BW04 601 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 TEX13BQ9BXU2 312 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 KATNBL1Q9H079 304 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 SIL1Q9H173 461 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 KCNH6Q9H252 994 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 KCTD10Q9H3F6 313 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 VCPKMTQ9H867 229 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 CABP5Q9NP86 173 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 CXXC1Q9P0U4 656 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-206ENST00000554429 LRP2BPQ9P2M1 347 aa2.99□□□□□ -1.93
PRPF39-206ENST00000554429 PNMA8BQ9ULN7 279 aaPredicted RBP2.99□□□□□ -1.93
PRPF39-206ENST00000554429 ATG2AQ2TAZ0 1938 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 KIAA1217Q5T5P2 1943 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FAM170AA1A519 330 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 LRRC72A6NJI9 287 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 AHCYL1O43865 530 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 DUSP11O75319 330 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 E2F6O75461 281 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MTRF1O75570 445 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CABYRO75952 493 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GUCA1CO95843 209 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PFKMP08237 780 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MYBP10242 640 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MYBL2P10244 700 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 KRT13P13646 458 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 AKR1A1P14550 325 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PLA2G5P39877 138 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 HADHAP40939 763 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 HTR3AP46098 478 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FPGSQ05932 587 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 EHHADHQ08426 723 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MAP3K12Q12852 859 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 NCOA4Q13772 614 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SEPT6Q14141 434 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SEMA3AQ14563 771 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GRM3Q14832 879 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 KRT72Q14CN4 511 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RAB30Q15771 203 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GFOD2Q3B7J2 385 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM60Q495X7 471 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 C8orf34Q49A92 452 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 PSRC1Q6PGN9 363 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 IGF2-ASQ6U949 168 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 BTNL9Q6UXG8 535 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MTERF4Q7Z6M4 381 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 STRA8Q7Z7C7 330 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CCDC84Q86UT8 332 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GALNT13Q8IUC8 556 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 ANKMY2Q8IV38 441 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RPAP2Q8IXW5 612 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CRACR2BQ8N4Y2 399 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 LSMEM1Q8N8F7 131 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 AFAP1L1Q8TED9 768 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 BADQ92934 168 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CEP95Q96GE4 821 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GMCL1Q96IK5 515 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RMDN2Q96LZ7 410 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 GPATCH1Q9BRR8 931 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RHOBTB2Q9BYZ6 727 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TRIM8Q9BZR9 551 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 HPS4Q9NQG7 708 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 AATFQ9NY61 560 aaKnown RBP eCLIP2.98□□□□□ -1.932e-7■■■■■ 32.8
PRPF39-206ENST00000554429 LMCD1Q9NZU5 365 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SIRPGQ9P1W8 387 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 LAMP5Q9UJQ1 280 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 DBNLQ9UJU6 430 aaKnown RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 TNKSO95271 1327 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MCM3APO60318 1980 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 A0A1W2PQ45 241 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 A0A1W2PQY0 241 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 A0A1W2PRG0 241 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CCDC66A2RUB6 948 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 K7ENM7 598 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 MYCP01106 439 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-206ENST00000554429 FCER1AP12319 257 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SYN1P17600 705 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 DESP17661 470 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 RFC2P35250 354 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 CHKAP35790 457 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 STAT3P40763 770 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 ZAP70P43403 619 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 NT5C2P49902 561 aa2.98□□□□□ -1.93
PRPF39-206ENST00000554429 SKOR1P84550 965 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms