RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 BSNDQ8WZ55 320 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 MRPS27Q92552 414 aaKnown RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 KIFAP3Q92845 792 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 LPPQ93052 612 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 NT5C3AQ9H0P0 336 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 C2orf40Q9H1Z8 148 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 FZD8Q9H461 694 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 RSAD1Q9HA92 442 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 TLR9Q9NR96 1032 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 TBC1D13Q9NVG8 400 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 PRMT7Q9NVM4 692 aaPredicted RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 DNM3Q9UQ16 869 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 MYH11P35749 1972 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 FSD2A1L4K1 749 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 VPS37CA5D8V6 355 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 VWA3AA6NCI4 1184 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 MEIS3P2A8K0S8 358 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 E9PMD0 336 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 SYT1P21579 422 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 CDC25AP30304 524 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 IRS1P35568 1242 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 LONP1P36776 959 aaKnown RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 EFNA5P52803 228 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 KRT17Q04695 432 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 RESTQ13127 1097 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM119Q4V9L6 283 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 SLC27A1Q6PCB7 646 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 MAEAQ7L5Y9 396 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 ADGRD2Q7Z7M1 963 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 URGCPQ8TCY9 931 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 CPB2Q96IY4 423 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 IFT74Q96LB3 600 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 PNMA5Q96PV4 448 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 TIPINQ9BVW5 301 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 EIF2AQ9BY44 585 aaKnown RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 C17orf75Q9HAS0 396 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 SPG21Q9NZD8 308 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 KCND2Q9NZV8 630 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 IPPQ9Y573 584 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 MORC2Q9Y6X9 1032 aaPredicted RBP8.32□□□□□ -1.08
LINC00640-201ENST00000554409 UNC80Q8N2C7 3258 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 REV3LO60673 3130 aa8.32□□□□□ -1.08
LINC00640-201ENST00000554409 TCF20Q9UGU0 1960 aaKnown RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 PHLPP2Q6ZVD8 1323 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 N4BP3O15049 544 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 B4GALT5O43286 388 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 HIP1RO75146 1068 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 ZC3H11AO75152 810 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 ITGA4P13612 1032 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 KCNA5P22460 613 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 GUCY2CP25092 1073 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 LTBRP36941 435 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 PBX3P40426 434 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 ALDH7A1P49419 539 aaKnown RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 BCAR1P56945 870 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 MAPK7Q13164 816 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 ADAM15Q13444 863 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 MAPK6Q16659 721 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 LONRF3Q496Y0 759 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 RINT1Q6NUQ1 792 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 C1orf186Q6ZWK4 172 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 HACE1Q8IYU2 909 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 DAW1Q8N136 415 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 EFHBQ8N7U6 833 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 SYT2Q8N9I0 419 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 DEPTORQ8TB45 409 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 UHRF1Q96T88 793 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 CDCA3Q99618 268 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM175Q9BSA9 504 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 NRDE2Q9H7Z3 1164 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 NGRNQ9NPE2 291 aaKnown RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 CLDND1Q9NY35 253 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 STK39Q9UEW8 545 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 MTMR6Q9Y217 621 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 GIT1Q9Y2X7 761 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
LINC00640-201ENST00000554409 PRUNE2Q8WUY3 3088 aa8.31□□□□□ -1.08
LINC00640-201ENST00000554409 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 GRXCR2A6NFK2 248 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ARL5CA6NH57 179 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ACKR2O00590 384 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 STX6O43752 255 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 TBX10O75333 385 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 DDHD2O94830 711 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 NPTXRO95502 500 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 EDN1P05305 212 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 PRKCBP05771 671 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms