RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 C9IYK1 514 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 BMP8BP34820 402 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 WDR5P61964 334 aaKnown RBP20.23■□□□□ 0.83
PSEN1-210ENST00000554131 FAM189BP81408 668 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 STRN3Q13033 797 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 IKBKEQ14164 716 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 ZNF658Q5TYW1 1059 aaPredicted RBP20.23■□□□□ 0.83
PSEN1-210ENST00000554131 ATF7IP2Q5U623 682 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 ZPBP2Q6X784 338 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.23■□□□□ 0.83
PSEN1-210ENST00000554131 EIF2AQ9BY44 585 aaKnown RBP20.23■□□□□ 0.83
PSEN1-210ENST00000554131 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 TNFSF13BQ9Y275 285 aa20.23■□□□□ 0.83
PSEN1-210ENST00000554131 RANBP2P49792 3224 aaKnown RBP20.22■□□□□ 0.83
PSEN1-210ENST00000554131 TISP43B9A030 160 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 ANKRD63C9JTQ0 380 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 ATF7P17544 494 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-210ENST00000554131 SHHQ15465 462 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 NOTUMQ6P988 496 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-210ENST00000554131 CCDC47Q96A33 483 aaKnown RBP20.22■□□□□ 0.83
PSEN1-210ENST00000554131 CCDC51Q96ER9 411 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 ZBTB45Q96K62 511 aaPredicted RBP20.22■□□□□ 0.83
PSEN1-210ENST00000554131 ACCSQ96QU6 501 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 STYXL1Q9Y6J8 313 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 TTC3P53804 2025 aa20.22■□□□□ 0.83
PSEN1-210ENST00000554131 TGFB1I1O43294 461 aa20.21■□□□□ 0.83
PSEN1-210ENST00000554131 ACTN1P12814 892 aa20.21■□□□□ 0.83
PSEN1-210ENST00000554131 DEFB103AP81534 67 aa20.21■□□□□ 0.83
PSEN1-210ENST00000554131 ISM2Q6H9L7 571 aa20.21■□□□□ 0.83
PSEN1-210ENST00000554131 ZNF598Q86UK7 904 aaKnown RBP20.21■□□□□ 0.83
PSEN1-210ENST00000554131 KCTD10Q9H3F6 313 aa20.21■□□□□ 0.83
PSEN1-210ENST00000554131 A0A0U1RQF3 1178 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 BIN1O00499 593 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 N4BP3O15049 544 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 EFCAB14O75071 495 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 ZNF623O75123 536 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 TOM1L1O75674 476 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 CD44P16070 742 aaKnown RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 ZSCAN20P17040 1043 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 ADSSP30520 456 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 SLC27A1Q6PCB7 646 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 STXBP4Q6ZWJ1 553 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 SLC24A5Q71RS6 500 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 TRIML1Q8N9V2 468 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 SMG8Q8ND04 991 aaKnown RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 UBE2OQ9C0C9 1292 aaKnown RBP20.2■□□□□ 0.82
PSEN1-210ENST00000554131 CDT1Q9H211 546 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 FAM105AQ9NUU6 356 aa20.2■□□□□ 0.82
PSEN1-210ENST00000554131 HNRNPDLO14979 420 aaKnown RBP20.19■□□□□ 0.82
PSEN1-210ENST00000554131 FAM189A1O60320 539 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 PRCPP42785 496 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 MCL1Q07820 350 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
PSEN1-210ENST00000554131 KNOP1Q1ED39 458 aaKnown RBP20.19■□□□□ 0.82
PSEN1-210ENST00000554131 CAVIN1Q6NZI2 390 aaKnown RBP20.19■□□□□ 0.82
PSEN1-210ENST00000554131 MPZL3Q6UWV2 235 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 MRPL10Q7Z7H8 261 aaKnown RBP20.19■□□□□ 0.82
PSEN1-210ENST00000554131 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 NELFCDQ8IXH7 590 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 MYOCDQ8IZQ8 938 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 TMEM206Q9H813 350 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
PSEN1-210ENST00000554131 PPP1R3GB7ZBB8 358 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 NPTXRO95502 500 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 LIG4P49917 911 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 ADSSL1Q8N142 457 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 TOP1MTQ969P6 601 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 RNF19AQ9NV58 838 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 EXOC7Q9UPT5 735 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 IPPQ9Y573 584 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 PCDHB2Q9Y5E7 798 aa20.18■□□□□ 0.82
PSEN1-210ENST00000554131 A0A0B4J269 797 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 MEIS3P2A8K0S8 358 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 RAB27AP51159 221 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 SKOR2Q2VWA4 1001 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-210ENST00000554131 DCAF4L1Q3SXM0 396 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 ZNF568Q3ZCX4 644 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 CHRDL2Q6WN34 429 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 TMCO2Q7Z6W1 182 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-210ENST00000554131 CEP120Q8N960 986 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 BICD1Q96G01 975 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 GTPBP4Q9BZE4 634 aaKnown RBP20.17■□□□□ 0.82
PSEN1-210ENST00000554131 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 RNF39Q9H2S5 420 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 SEMA6BQ9H3T3 888 aa20.17■□□□□ 0.82
PSEN1-210ENST00000554131 NXF3Q9H4D5 531 aaKnown RBP20.17■□□□□ 0.82
PSEN1-210ENST00000554131 ELAC1Q9H777 363 aaKnown RBP20.17■□□□□ 0.82
PSEN1-210ENST00000554131 CLDN3O15551 220 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 MEFVO15553 781 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 MCF2P10911 925 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 NOLC1Q14978 699 aaKnown RBP eCLIP20.16■□□□□ 0.82
PSEN1-210ENST00000554131 AGMOQ6ZNB7 445 aa20.16■□□□□ 0.82
PSEN1-210ENST00000554131 ZBTB33Q86T24 672 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms