RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 TMEM175Q9BSA9 504 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
TUBB3-204ENST00000554116 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 SEMA4AQ9H3S1 761 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 RSAD1Q9HA92 442 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 RXFP1Q9HBX9 757 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
TUBB3-204ENST00000554116 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 MAN1C1Q9NR34 630 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
TUBB3-204ENST00000554116 CCDC195A0A1B0GUA6 201 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 C2CD2LO14523 706 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 SRGAP2CP0DJJ0 459 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 QARSP47897 775 aaKnown RBP12.92□□□□□ -0.34
TUBB3-204ENST00000554116 SPIRE1Q08AE8 756 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 STK3Q13188 491 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
TUBB3-204ENST00000554116 AMHR2Q16671 573 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 INF2Q27J81 1249 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 LILRA6Q6PI73 481 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 SLC44A3Q8N4M1 653 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 PGBD4Q96DM1 585 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 HERC2P3Q9BVR0 1158 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 BMP2KQ9NSY1 1161 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-204ENST00000554116 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 RGL1Q9NZL6 768 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 DLGAP2Q9P1A6 1054 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 KCNJ14Q9UNX9 436 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-204ENST00000554116 HES2Q9Y543 173 aa12.92□□□□□ -0.34
TUBB3-204ENST00000554116 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 TSPAN1O60635 241 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 ANAPC15P60006 121 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 DGLUCYQ7Z3D6 616 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 GAD1Q99259 594 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 GPR62Q9BZJ7 368 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 WNT16Q9UBV4 365 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
TUBB3-204ENST00000554116 IPPQ9Y573 584 aa12.91□□□□□ -0.34
TUBB3-204ENST00000554116 ZFHX4Q86UP3 3567 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 CPLX1O14810 134 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 SEC24BO95487 1268 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 LMNAP02545 664 aaKnown RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 CFHP08603 1231 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 GLULP15104 373 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 SCNN1GP51170 649 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 AK2P54819 239 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 DSG1Q02413 1049 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 RNF149Q8NC42 400 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 URGCPQ8TCY9 931 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 RPP25Q9BUL9 199 aaKnown RBP12.9□□□□□ -0.34
TUBB3-204ENST00000554116 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
TUBB3-204ENST00000554116 VWA8A3KMH1 1905 aa12.9□□□□□ -0.35
TUBB3-204ENST00000554116 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.35
TUBB3-204ENST00000554116 CLUHO75153 1309 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 FAM205CA6NFA0 338 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 ANHXE9PGG2 379 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 TGM5O43548 720 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 DEXIO95424 95 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 MLH1P40692 756 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 OR1G1P47890 313 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 PTENP60484 403 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 EMC2Q15006 297 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 NONOQ15233 471 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUBB3-204ENST00000554116 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
TUBB3-204ENST00000554116 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-204ENST00000554116 MAML2Q8IZL2 1156 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-204ENST00000554116 SLC7A3Q8WY07 619 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms