RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SEPT11Q9NVA2 429 aaKnown RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SMPD4Q9NXE4 827 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 ABI2Q9NYB9 513 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-205ENST00000554081 DNAJB4Q9UDY4 337 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 SLC27A5Q9Y2P5 690 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CEP83Q9Y592 693 aa2.76□□□□□ -1.97
PRPF39-205ENST00000554081 CREBBPQ92793 2442 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 LAMB4A4D0S4 1761 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EPOPA6NHQ4 379 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 HIDE1A8MVS5 230 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CLDN3O15551 220 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF862O60290 1169 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 GFRA3O60609 400 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SOAT2O75908 522 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 F2P00734 622 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 OR4Q2P0C623 313 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 OR1D2P34982 312 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 DEKP35659 375 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 NTHL1P78549 312 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 HMGN5P82970 282 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 LAMTOR4Q0VGL1 99 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 PTK7Q13308 1070 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 AP3B2Q13367 1082 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 LPIN1Q14693 890 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SNX17Q15036 470 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TJAP1Q5JTD0 557 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 HAUS3Q68CZ6 603 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC62Q6P9F0 684 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 BTNL9Q6UXG8 535 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SLC24A5Q71RS6 500 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF467Q7Z7K2 595 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 PHLDB2Q86SQ0 1253 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 KLHDC9Q8NEP7 349 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SLC22A17Q8WUG5 538 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ATOH1Q92858 354 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 FAM167AQ96KS9 214 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TOX2Q96NM4 488 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SLC9A7Q96T83 725 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 C16orf70Q9BSU1 422 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 MED10Q9BTT4 135 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CFHR5Q9BXR6 569 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 KDM4CQ9H3R0 1056 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EPHX3Q9H6B9 360 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 UBE2ZQ9H832 354 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 RSAD1Q9HA92 442 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CYP26B1Q9NR63 512 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 MRPL17Q9NRX2 175 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SPG21Q9NZD8 308 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC39Q9UFE4 941 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 FAM50BQ9Y247 325 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 INVSQ9Y283 1065 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 PCDHB2Q9Y5E7 798 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 RBM47A0AV96 593 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 HMGB1P1B2RPK0 211 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 PIK3R2O00459 728 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 KIAA0355O15063 1070 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 MAGEB2O15479 319 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 LRG1P02750 347 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 HMBSP08397 361 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SRGAP2BP0DMP2 458 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CD19P15391 556 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 KCNA2P16389 499 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EPCAMP16422 314 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TRAPPC10P48553 1259 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 JAK3P52333 1124 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 STX17P56962 302 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CYP27A1Q02318 531 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ORC1Q13415 861 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TRPC3Q13507 836 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 RABEP1Q15276 862 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TCEA2Q15560 299 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 DCAF17Q5H9S7 520 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 NOMO2Q5JPE7 1267 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 FBXO47Q5MNV8 452 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 C1orf228Q6PIY5 440 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC149Q6ZUS6 474 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ALYREFQ86V81 257 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF280BQ86YH2 543 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 GRAMD1CQ8IYS0 662 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CEP57L1Q8IYX8 460 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM130Q8N3G9 435 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 MSL3Q8N5Y2 521 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 GANCQ8TET4 914 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 GIPC2Q8TF65 315 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 GTF3C6Q969F1 213 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC47Q96A33 483 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ACSF2Q96CM8 615 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EPSTI1Q96J88 318 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 NACC1Q96RE7 527 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 JPH2Q9BR39 696 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EIF2AQ9BY44 585 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ADAM7Q9H2U9 754 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ST7Q9NRC1 585 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 FAM105AQ9NUU6 356 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 LARSQ9P2J5 1176 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 MRPS23Q9Y3D9 190 aaKnown RBP2.75□□□□□ -1.97
PRPF39-205ENST00000554081 EMSYQ7Z589 1322 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 SVILO95425 2214 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 ZSWIM8A7E2V4 1837 aa2.75□□□□□ -1.97
PRPF39-205ENST00000554081 A0A1B0GVL5 298 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms