RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZHX2Q9Y6X8 837 aa7.39□□□□□ -1.23
ATXN3-223ENST00000553686 TAF1P21675 1872 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 MEFVO15553 781 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 NTRK1P04629 796 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CAPNS1P04632 268 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 HOXB7P09629 217 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 PI3P19957 117 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CYP2B6P20813 491 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 GFRA1P56159 465 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CHRNDQ07001 517 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 PABPC4Q13310 644 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 CCDC103Q8IW40 242 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 PEX11GQ96HA9 241 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 MYD88Q99836 296 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 MRIQ9BWK5 157 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 PRDM12Q9H4Q4 367 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
ATXN3-223ENST00000553686 TIMM13Q9Y5L4 95 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-223ENST00000553686 COL3A1P02461 1466 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-223ENST00000553686 PI4K2BG5E9Z4 385 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 RFXAPO00287 272 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 DNM1LO00429 736 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 PFKLP17858 780 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
ATXN3-223ENST00000553686 RBM10P98175 930 aaKnown RBP7.37□□□□□ -1.23
ATXN3-223ENST00000553686 HSP90AA2PQ14568 343 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-223ENST00000553686 TARBP2Q15633 366 aaKnown RBP7.37□□□□□ -1.23
ATXN3-223ENST00000553686 CCDC129Q6ZRS4 1044 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 NETO2Q8NC67 525 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 ARRDC4Q8NCT1 418 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 HERVK_113Q902F9 699 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 NUDT5Q9UKK9 219 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 AGTPBP1Q9UPW5 1226 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 JAG2Q9Y219 1238 aa7.37□□□□□ -1.23
ATXN3-223ENST00000553686 ARID1BQ8NFD5 2236 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 MYBBP1AQ9BQG0 1328 aaKnown RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 C22orf46C9J442 243 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 ERC2O15083 957 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 DDX58O95786 925 aaKnown RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 CACNB3P54284 484 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 DENND5AQ6IQ26 1287 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 SLC39A5Q6ZMH5 540 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 CEP68Q76N32 757 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 TEX2Q8IWB9 1127 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 RCBTB1Q8NDN9 531 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 ST13P5Q8NFI4 369 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 FAM151AQ8WW52 585 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 LPAR1Q92633 364 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 BCAS3Q9H6U6 928 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 EPB41L4AQ9HCS5 686 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-223ENST00000553686 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 COG5Q9UP83 839 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 AFG3L2Q9Y4W6 797 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
ATXN3-223ENST00000553686 RPAP1Q9BWH6 1393 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-223ENST00000553686 MAPK8IP3Q9UPT6 1336 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-223ENST00000553686 LTBRP36941 435 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 BCL6P41182 706 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 RGS2P41220 211 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 KCNQ1P51787 676 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 TFF2Q03403 129 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 FPGSQ05932 587 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 ACBD5Q5T8D3 534 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-223ENST00000553686 MFSD14CQ5VZR4 134 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 WWC2Q6AWC2 1192 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 CNKSR3Q6P9H4 555 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 SPOCD1Q6ZMY3 1216 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 SCYL3Q8IZE3 742 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 TBC1D22AQ8WUA7 517 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 KCTD13Q8WZ19 329 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 ALG3Q92685 438 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 IER2Q9BTL4 223 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 MSRAQ9UJ68 235 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 SIT1Q9Y3P8 196 aa7.35□□□□□ -1.23
ATXN3-223ENST00000553686 TRIM43BA6NCK2 446 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 KBTBD13C9JR72 458 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 SNAP23O00161 211 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TAF5LO75529 589 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 NCAM1P13591 858 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 ALADP13716 330 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms