RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 MSH4O15457 936 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 EDIL3O43854 480 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 EOMESO95936 686 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 DARSP14868 501 aaKnown RBP17.71■□□□□ 0.43
ACTN1-209ENST00000553659 SFNP31947 248 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 MCM7P33993 719 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 GPC3P51654 580 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 USP11P51784 963 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 TMC7Q7Z402 723 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 PRSS33Q8NF86 280 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 SMARCE1Q969G3 411 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 RIT2Q99578 217 aa17.71■□□□□ 0.43
ACTN1-209ENST00000553659 WDFY4Q6ZS81 3184 aa17.71■□□□□ 0.42
ACTN1-209ENST00000553659 VWA3AA6NCI4 1184 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 ACTN4O43707 911 aaKnown RBP17.7■□□□□ 0.42
ACTN1-209ENST00000553659 CLCN1P35523 988 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 PBX3P40426 434 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 PTPN5P54829 565 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 PRKCEQ02156 737 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 CLLU1OSQ5K130 101 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 LLGL2Q6P1M3 1020 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 ZNF598Q86UK7 904 aaKnown RBP17.7■□□□□ 0.42
ACTN1-209ENST00000553659 MLKLQ8NB16 471 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 RNF169Q8NCN4 708 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 SLC5A5Q92911 643 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 MRFAP1L1Q96HT8 127 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 ZNF668Q96K58 619 aaPredicted RBP17.7■□□□□ 0.42
ACTN1-209ENST00000553659 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 MAGEF1Q9HAY2 307 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 SERTAD1Q9UHV2 236 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 ZKSCAN5Q9Y2L8 839 aa17.7■□□□□ 0.42
ACTN1-209ENST00000553659 GAS7O60861 476 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 MYL1P05976 194 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 ZNF75DP51815 510 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 JAK3P52333 1124 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 CDC42EP1Q00587 391 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 GRIN1Q05586 938 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 TBC1D8BQ0IIM8 1120 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 SMC1AQ14683 1233 aaKnown RBP17.69■□□□□ 0.42
ACTN1-209ENST00000553659 TARBP2Q15633 366 aaKnown RBP17.69■□□□□ 0.42
ACTN1-209ENST00000553659 UGCGQ16739 394 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 INF2Q27J81 1249 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
ACTN1-209ENST00000553659 SLC39A11Q8N1S5 342 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 C4orf32Q8N8J7 132 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 MRPL43Q8N983 215 aaKnown RBP17.69■□□□□ 0.42
ACTN1-209ENST00000553659 CASP10Q92851 521 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 ASIC4Q96FT7 647 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 TEKT3Q9BXF9 490 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 CUEDC2Q9H467 287 aa17.69■□□□□ 0.42
ACTN1-209ENST00000553659 C2orf71A6NGG8 1288 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 OR52Z1P0C646 297 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 FGFR4P22455 802 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 PNOCQ13519 176 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 DPCR1Q3MIW9 517 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 AOPEPQ8N6M6 819 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 RDM1Q8NG50 284 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 HELQQ8TDG4 1101 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 NLRP7Q8WX94 980 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 GSDMAQ96QA5 445 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 PHOX2BQ99453 314 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 MRPL9Q9BYD2 267 aaKnown RBP17.68■□□□□ 0.42
ACTN1-209ENST00000553659 NIFKQ9BYG3 293 aaKnown RBP17.68■□□□□ 0.42
ACTN1-209ENST00000553659 UNC45AQ9H3U1 944 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 CHST12Q9NRB3 414 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 PCDHA5Q9Y5H7 936 aa17.68■□□□□ 0.42
ACTN1-209ENST00000553659 CHMP2AO43633 222 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 NEMFO60524 1076 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
ACTN1-209ENST00000553659 ALDH7A1P49419 539 aaKnown RBP17.67■□□□□ 0.42
ACTN1-209ENST00000553659 TCF15Q12870 199 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
ACTN1-209ENST00000553659 SPECC1Q5M775 1068 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 CES5AQ6NT32 575 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 DHX58Q96C10 678 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
ACTN1-209ENST00000553659 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
ACTN1-209ENST00000553659 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 CCSER1Q9C0I3 900 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 ADAM7Q9H2U9 754 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 RMND1Q9NWS8 449 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 NR2E1Q9Y466 385 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 HCFC2Q9Y5Z7 792 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
ACTN1-209ENST00000553659 CLASP2O75122 1294 aaKnown RBP17.66■□□□□ 0.42
ACTN1-209ENST00000553659 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
ACTN1-209ENST00000553659 PSMD10O75832 226 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 CXCL14O95715 111 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 AVPR2P30518 371 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 BCAR1P56945 870 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 MYL5Q02045 173 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 ITIH3Q06033 890 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 DRP2Q13474 957 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms