RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 TATDN1Q6P1N9 297 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ZDHHC24Q6UX98 284 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TMEM179Q6ZVK1 233 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 C1orf186Q6ZWK4 172 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 INTS8Q75QN2 995 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TRMT10CQ7L0Y3 403 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TAOK1Q7L7X3 1001 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PIGWQ7Z7B1 504 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 FBXO11Q86XK2 927 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SP8Q8IXZ3 490 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 FUKQ8N0W3 1084 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC197Q8NCU1 140 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC17A8Q8NDX2 589 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ANKK1Q8NFD2 765 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC35G2Q8TBE7 412 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 U2AF1L4Q8WU68 220 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MAIP1Q8WWC4 291 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 RAPGEF5Q92565 580 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC5A5Q92911 643 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TEKT1Q969V4 418 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MAGOHBQ96A72 148 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 CCDC114Q96M63 670 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ZDHHC15Q96MV8 337 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 FIZ1Q96SL8 496 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 HSD17B14Q9BPX1 270 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TIPINQ9BVW5 301 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PLVAPQ9BX97 442 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 AP1M1Q9BXS5 423 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 OSBPL7Q9BZF2 842 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 WDR11Q9BZH6 1224 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 GPR88Q9GZN0 384 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 INTS2Q9H0H0 1204 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 WNT8AQ9H1J5 351 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 DEFB129Q9H1M3 183 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TAOK3Q9H2K8 898 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ST6GALNAC4Q9H4F1 302 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 EHMT1Q9H9B1 1298 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ATP6V0A4Q9HBG4 840 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PARVGQ9HBI0 331 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 DDX4Q9NQI0 724 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 AGPAT3Q9NRZ7 376 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 GRHL1Q9NZI5 618 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TBC1D7Q9P0N9 293 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 POLLQ9UGP5 575 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MCM8Q9UJA3 840 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 AJAP1Q9UKB5 411 aaPredicted RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MTMR7Q9Y216 660 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 JAG2Q9Y219 1238 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 FRMD4BQ9Y2L6 1034 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC27A5Q9Y2P5 690 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 AFF2P51816 1311 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 NPHP3-ACAD11A0A0J9YXS1 232 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L15C9J2P7 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L13C9JLJ4 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L11C9JVI0 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L18D6R9N7 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L22D6RA61 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L17D6RBQ6 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L19D6RCP7 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L20D6RJB6 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 F8W031 263 aaPredicted RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 MSH4O15457 936 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PPIP5K2O43314 1243 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PLA2G6O60733 806 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 RTN2O75298 545 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PSMD10O75832 226 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM13AO94988 1023 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 OAS1P00973 400 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 MMEP08473 750 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ITGA4P13612 1032 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ALADP13716 330 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SKIV2L2P42285 1042 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PTGIRP43119 386 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SCTRP47872 440 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PDE6CP51160 858 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 MRPS25P82663 173 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CAV1Q03135 178 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L24Q0WX57 530 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CETN1Q12798 172 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 BFSP1Q12934 665 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CTTNQ14247 550 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 DRAP1Q14919 205 aaPredicted RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 NR6A1Q15406 480 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 TRADDQ15628 312 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 PRR16Q569H4 304 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 RNF187Q5TA31 235 aaPredicted RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SYDE2Q5VT97 1194 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 TCERG1LQ5VWI1 586 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 SLFN13Q68D06 897 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 TTC19Q6DKK2 380 aaPredicted RBP5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 TTBK2Q6IQ55 1244 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CDC42EP5Q6NZY7 148 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 USP17L6PQ6QN14 398 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 B3GNT9Q6UX72 402 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 CEP128Q6ZU80 1094 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 NIPA1Q7RTP0 329 aa5.66□□□□□ -1.5
TMEM55B-204ENST00000553602 ZNF720Q7Z2F6 126 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms