RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 MYL3P08590 195 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 HOXA5P20719 270 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 FBLN1P23142 703 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 TM4SF4P48230 202 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 IL13RA1P78552 427 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 MGAT2Q10469 447 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 IL10RAQ13651 578 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 DGKDQ16760 1214 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 GRAMD1BQ3KR37 738 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 FAM83BQ5T0W9 1011 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 THEMIS2Q5TEJ8 643 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 FAM180AQ6UWF9 173 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 DPP8Q6V1X1 898 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-209ENST00000553280 SRLQ86TD4 932 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 GLB1L2Q8IW92 636 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 ENAHQ8N8S7 591 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-209ENST00000553280 GPR156Q8NFN8 814 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-209ENST00000553280 SOX7Q9BT81 388 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 PLCB1Q9NQ66 1216 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
SCFD1-209ENST00000553280 A0A088AWK7 358 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 SLC16A6O15403 523 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 TRIM13O60858 407 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 C8BP07358 591 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 NCAM1P13591 858 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 ZKSCAN1P17029 563 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-209ENST00000553280 LIMS1P48059 325 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 ANTXR2P58335 489 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 GPSM2P81274 684 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 CD83Q01151 205 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 MAP3K12Q12852 859 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 MIGA2Q7L4E1 593 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 DAAM2Q86T65 1068 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 TTC7BQ86TV6 843 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 OR2I1PQ8NGU4 316 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 OSBPL6Q9BZF3 934 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 NUP62CLQ9H1M0 184 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 PCDH18Q9HCL0 1135 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 STXBP5LQ9Y2K9 1186 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 PCDHB1Q9Y5F3 818 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 PCDHGB6Q9Y5F9 930 aa6.29□□□□□ -1.4
SCFD1-209ENST00000553280 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 FAM171A2A8MVW0 826 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 FOSP01100 380 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 PEX2P28328 305 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 GLRBP48167 497 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 MAP2K6P52564 334 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 CTSWP56202 376 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 KRT72Q14CN4 511 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 NOMO1Q15155 1222 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 CNN3Q15417 329 aaKnown RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 LONRF1Q17RB8 773 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 LMBR1LQ6UX01 489 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 IFNL2Q8IZJ0 200 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 OR5AN1Q8NGI8 311 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 NSUN6Q8TEA1 469 aaKnown RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 KAT5Q92993 513 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 PGBD4Q96DM1 585 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 DYDC2Q96IM9 177 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 CDK5RAP3Q96JB5 506 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 PWWP2AQ96N64 755 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 PTPN18Q99952 460 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 C7orf25Q9BPX7 421 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 TACO1Q9BSH4 297 aaKnown RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-209ENST00000553280 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 POLHQ9Y253 713 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 PCDHA13Q9Y5I0 950 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 ADAMTS20P59510 1910 aa6.28□□□□□ -1.4
SCFD1-209ENST00000553280 RPTORQ8N122 1335 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 A0A1W2PR48 441 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 SGTAO43765 313 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 MEF2AQ02078 507 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-209ENST00000553280 MGAT5Q09328 741 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 IFIT5Q13325 482 aaKnown RBP6.27□□□□□ -1.41
SCFD1-209ENST00000553280 SEPT2Q15019 361 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 MAN2A1Q16706 1144 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 GRAMD4Q6IC98 578 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 SWSAP1Q6NVH7 229 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 ERAP2Q6P179 960 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 MAEAQ7L5Y9 396 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 DRC7Q8IY82 874 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 ACRBPQ8NEB7 543 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCFD1-209ENST00000553280 LRTOMTQ8WZ04 291 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 RGMAQ96B86 450 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 CCDC138Q96M89 665 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 KCNC2Q96PR1 638 aa6.27□□□□□ -1.41
SCFD1-209ENST00000553280 TBCBQ99426 244 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms